Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
HI_0278Predicted coding region HI0278; Hypothetical protein; identified by GeneMark; putative. (138 aa)    
Predicted Functional Partners:
HI_0279
Predicted coding region HI0279; Hypothetical protein; identified by GeneMark; putative.
      0.930
HI_0276
Ribonuclease BN (rbn); Similar to GB:L19201 SP:P32146 PID:304990 GB:U00096 PID:1790319 percent identity: 45.06; identified by sequence similarity; putative.
       0.773
HI_0277
Conserved hypothetical protein; Similar to GB:L20251 SP:P37052 PID:410154 GB:U00096 PID:1787484 percent identity: 37.16; identified by sequence similarity; putative; Belongs to the UPF0225 family.
       0.773
udp
Uridine phosphorylase (udp); Catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1-phosphate. The produced molecules are then utilized as carbon and energy sources or in the rescue of pyrimidine bases for nucleotide synthesis (By similarity).
       0.483
moaE
Molybdopterin converting factor, subunit 2 (moaE); Converts molybdopterin precursor Z into molybdopterin. This requires the incorporation of two sulfur atoms into precursor Z to generate a dithiolene group. The sulfur is provided by MoaD (By similarity); Belongs to the MoaE family.
 
  
 0.421
Your Current Organism:
Haemophilus influenzae
NCBI taxonomy Id: 71421
Other names: H. influenzae Rd KW20, Haemophilus influenzae KW20, Haemophilus influenzae Rd, Haemophilus influenzae Rd KW20
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