| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| HI_1151 | obg | HI_1151 | HI_0877 | Conserved hypothetical protein; Similar to SP:P26650 GB:M95096 PID:148266 PID:537076 GB:U00096 percent identity: 62.20; identified by sequence similarity; putative; Belongs to the UPF0307 family. | GTP-binding protein (yhbZ); An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. | 0.614 |
| HI_1151 | rluC | HI_1151 | HI_0412 | Conserved hypothetical protein; Similar to SP:P26650 GB:M95096 PID:148266 PID:537076 GB:U00096 percent identity: 62.20; identified by sequence similarity; putative; Belongs to the UPF0307 family. | Conserved hypothetical protein; Responsible for synthesis of pseudouridine from uracil at positions 955, 2504 and 2580 in 23S ribosomal RNA; Belongs to the pseudouridine synthase RluA family. | 0.475 |
| HI_1151 | rplC | HI_1151 | HI_0777 | Conserved hypothetical protein; Similar to SP:P26650 GB:M95096 PID:148266 PID:537076 GB:U00096 percent identity: 62.20; identified by sequence similarity; putative; Belongs to the UPF0307 family. | Ribosomal protein L3 (rpL3); One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. | 0.662 |
| HI_1151 | rplD | HI_1151 | HI_0778 | Conserved hypothetical protein; Similar to SP:P26650 GB:M95096 PID:148266 PID:537076 GB:U00096 percent identity: 62.20; identified by sequence similarity; putative; Belongs to the UPF0307 family. | Ribosomal protein L4 (rpL4); One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome (By similarity). This protein when expressed in E.coli represses both transcription and translation of the endogenous S10 operon. As the H.influenzae S10 leader can be regulated in vitro by the E.coli L4 protein this strongly suggests the endogenous protein controls its own S10 operon in a sim [...] | 0.610 |
| HI_1151 | rplO | HI_1151 | HI_0797 | Conserved hypothetical protein; Similar to SP:P26650 GB:M95096 PID:148266 PID:537076 GB:U00096 percent identity: 62.20; identified by sequence similarity; putative; Belongs to the UPF0307 family. | Ribosomal protein L15 (rpL15); Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. | 0.610 |
| HI_1151 | rplQ | HI_1151 | HI_0803 | Conserved hypothetical protein; Similar to SP:P26650 GB:M95096 PID:148266 PID:537076 GB:U00096 percent identity: 62.20; identified by sequence similarity; putative; Belongs to the UPF0307 family. | Ribosomal protein L17 (rplQ); Similar to GB:J01685 SP:P02416 GB:X00766 PID:147716 PID:42800 percent identity: 89.76; identified by sequence similarity; putative. | 0.610 |
| HI_1151 | rsfS | HI_1151 | HI_0034 | Conserved hypothetical protein; Similar to SP:P26650 GB:M95096 PID:148266 PID:537076 GB:U00096 percent identity: 62.20; identified by sequence similarity; putative; Belongs to the UPF0307 family. | Conserved hypothetical protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation. | 0.610 |
| bamE | rluC | HI_0838 | HI_0412 | Small protein A, putative; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | Conserved hypothetical protein; Responsible for synthesis of pseudouridine from uracil at positions 955, 2504 and 2580 in 23S ribosomal RNA; Belongs to the pseudouridine synthase RluA family. | 0.473 |
| hfq | rluC | HI_0411 | HI_0412 | Host factor-I protein (hfq); RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs. Belongs to the Hfq family. | Conserved hypothetical protein; Responsible for synthesis of pseudouridine from uracil at positions 955, 2504 and 2580 in 23S ribosomal RNA; Belongs to the pseudouridine synthase RluA family. | 0.680 |
| obg | HI_1151 | HI_0877 | HI_1151 | GTP-binding protein (yhbZ); An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. | Conserved hypothetical protein; Similar to SP:P26650 GB:M95096 PID:148266 PID:537076 GB:U00096 percent identity: 62.20; identified by sequence similarity; putative; Belongs to the UPF0307 family. | 0.614 |
| obg | rluC | HI_0877 | HI_0412 | GTP-binding protein (yhbZ); An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. | Conserved hypothetical protein; Responsible for synthesis of pseudouridine from uracil at positions 955, 2504 and 2580 in 23S ribosomal RNA; Belongs to the pseudouridine synthase RluA family. | 0.578 |
| obg | rplC | HI_0877 | HI_0777 | GTP-binding protein (yhbZ); An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. | Ribosomal protein L3 (rpL3); One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. | 0.869 |
| obg | rplD | HI_0877 | HI_0778 | GTP-binding protein (yhbZ); An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. | Ribosomal protein L4 (rpL4); One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome (By similarity). This protein when expressed in E.coli represses both transcription and translation of the endogenous S10 operon. As the H.influenzae S10 leader can be regulated in vitro by the E.coli L4 protein this strongly suggests the endogenous protein controls its own S10 operon in a sim [...] | 0.868 |
| obg | rplO | HI_0877 | HI_0797 | GTP-binding protein (yhbZ); An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. | Ribosomal protein L15 (rpL15); Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. | 0.884 |
| obg | rplQ | HI_0877 | HI_0803 | GTP-binding protein (yhbZ); An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. | Ribosomal protein L17 (rplQ); Similar to GB:J01685 SP:P02416 GB:X00766 PID:147716 PID:42800 percent identity: 89.76; identified by sequence similarity; putative. | 0.881 |
| obg | rsfS | HI_0877 | HI_0034 | GTP-binding protein (yhbZ); An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. | Conserved hypothetical protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation. | 0.885 |
| rlmB | rluC | HI_0860 | HI_0412 | Conserved hypothetical protein; Specifically methylates the ribose of guanosine 2251 in 23S rRNA. | Conserved hypothetical protein; Responsible for synthesis of pseudouridine from uracil at positions 955, 2504 and 2580 in 23S ribosomal RNA; Belongs to the pseudouridine synthase RluA family. | 0.531 |
| rlmB | rplC | HI_0860 | HI_0777 | Conserved hypothetical protein; Specifically methylates the ribose of guanosine 2251 in 23S rRNA. | Ribosomal protein L3 (rpL3); One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. | 0.644 |
| rlmB | rplD | HI_0860 | HI_0778 | Conserved hypothetical protein; Specifically methylates the ribose of guanosine 2251 in 23S rRNA. | Ribosomal protein L4 (rpL4); One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome (By similarity). This protein when expressed in E.coli represses both transcription and translation of the endogenous S10 operon. As the H.influenzae S10 leader can be regulated in vitro by the E.coli L4 protein this strongly suggests the endogenous protein controls its own S10 operon in a sim [...] | 0.435 |
| rlmB | rplO | HI_0860 | HI_0797 | Conserved hypothetical protein; Specifically methylates the ribose of guanosine 2251 in 23S rRNA. | Ribosomal protein L15 (rpL15); Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. | 0.636 |
