STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
HI_0451Conserved hypothetical protein; Similar to PID:1196479 percent identity: 56.67; identified by sequence similarity; putative. (63 aa)    
Predicted Functional Partners:
vapD
Virulence associated protein D (vapD); Cleaves ssRNA, mostly between U:A; Belongs to the VapD ribonuclease family.
   
 
 0.986
HI_1250
Predicted coding region HI1250; Hypothetical protein; identified by GeneMark; putative.
      
 0.618
HI_1251
Virulence associated protein A (vapA); Similar to PID:1002991 PID:563265 SP:Q46560 percent identity: 38.10; identified by sequence similarity; putative; Belongs to the VapA/VapI family.
      
 0.618
HI_0452
Conserved hypothetical protein; Similar to GB:U14003 SP:P39319 PID:537059 GB:U00096 PID:1790664 percent identity: 52.57; identified by sequence similarity; putative.
       0.572
HI_0449
Predicted coding region HI0449; Hypothetical protein; identified by GeneMark; putative.
       0.547
HI_0453
Conserved hypothetical protein; Similar to GB:AE000511 PID:2313105 percent identity: 41.52; identified by sequence similarity; putative.
       0.465
HI_0454
Conserved hypothetical protein; Similar to SP:P37346 GB:U00096 PID:1787342 percent identity: 59.92; identified by sequence similarity; putative.
       0.424
fruA
PTS system, fructose-specific IIBC component (fruA); The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. The enzyme II FruAB PTS system is involved in fructose transport.
       0.417
fruK
1-phosphofructokinase (fruK); Similar to SP:P23539 GB:X53948 PID:405894 PID:41487 GB:U00096 percent identity: 55.41; identified by sequence similarity; putative; Belongs to the carbohydrate kinase PfkB family.
       0.417
fruB
PTS system, fructose-specific IIA/FPr component (fruB); The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. The enzyme II FruAB PTS system is involved in fructose transport.
       0.417
Your Current Organism:
Haemophilus influenzae
NCBI taxonomy Id: 71421
Other names: H. influenzae Rd KW20, Haemophilus influenzae KW20, Haemophilus influenzae Rd, Haemophilus influenzae Rd KW20
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