STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HI_0489Conserved hypothetical protein; Similar to GB:U00096 PID:1789045 percent identity: 50.38; identified by sequence similarity; putative. (157 aa)    
Predicted Functional Partners:
HI_0488
Conserved hypothetical protein; Similar to GB:U00096 PID:1789046 percent identity: 42.25; identified by sequence similarity; putative; Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family.
  
    0.826
HI_1629
dedA protein, putative; Similar to GB:M68934 SP:P09548 GB:X02743 PID:146363 GB:U00096 percent identity: 30.38; identified by sequence similarity; putative.
      
 0.613
HI_0487
Predicted coding region HI0487; Hypothetical protein; identified by GeneMark; putative.
       0.539
luxS
Conserved hypothetical protein; Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5-dihydroxy-2,3-pentadione (DPD); Belongs to the LuxS family.
       0.452
HI_1048
Predicted coding region HI1048; Hypothetical protein; identified by GeneMark; putative.
  
     0.403
Your Current Organism:
Haemophilus influenzae
NCBI taxonomy Id: 71421
Other names: H. influenzae Rd KW20, Haemophilus influenzae KW20, Haemophilus influenzae Rd, Haemophilus influenzae Rd KW20
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.