Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
HI_0575Conserved hypothetical protein; Similar to SP:P45533 PID:606280 GB:U00096 PID:1789744 percent identity: 67.42; identified by sequence similarity; putative; To E.coli YheO. (221 aa)    
Predicted Functional Partners:
tusC
Conserved hypothetical protein; Could be part of a sulfur-relay system; Belongs to the DsrF/TusC family.
 
  
 0.860
HI_0577
Predicted coding region HI0577; Hypothetical protein; identified by GeneMark; putative.
     
 0.845
tusD
Conserved hypothetical protein; Could be part of a sulfur-relay system; Belongs to the DsrE/TusD family.
  
  
 0.843
HI_1582
Conserved hypothetical protein; Similar to PID:1204257 SP:P52008 GB:U00096 PID:1788183 percent identity: 40.56; identified by sequence similarity; putative; To E.coli YecM.
  
     0.577
HI_0341
Conserved hypothetical protein; Similar to SP:P38521 PID:882488 GB:U00096 PID:1789329 percent identity: 55.65; identified by sequence similarity; putative; To E.coli YggL.
  
     0.566
HI_1724
Conserved hypothetical protein; Similar to SP:P45567 GB:U00096 PID:1786310 percent identity: 38.98; identified by sequence similarity; putative; Belongs to the UPF0231 family.
  
     0.561
HI_0574
FkbP-type peptidyl-prolyl cis-trans isomerase (fkpA); PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides (By similarity); Belongs to the FKBP-type PPIase family.
       0.544
HI_0866
Predicted coding region HI0866; Hypothetical protein; identified by GeneMark; putative.
  
     0.491
HI_1394
Conserved hypothetical protein; Similar to PID:887850 GB:U00096 SP:Q46828 PID:1789267 percent identity: 68.32; identified by sequence similarity; putative; Belongs to the UPF0267 family.
  
     0.478
HI_0521
Conserved hypothetical protein; Similar to GB:U14003 SP:P37342 PID:537220 GB:U00096 PID:1790840 percent identity: 40.88; identified by sequence similarity; putative; To E.coli YjjI.
  
     0.473
Your Current Organism:
Haemophilus influenzae
NCBI taxonomy Id: 71421
Other names: H. influenzae Rd KW20, Haemophilus influenzae KW20, Haemophilus influenzae Rd, Haemophilus influenzae Rd KW20
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