STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
HI_0585Predicted coding region HI0585; Hypothetical protein; identified by GeneMark; putative. (279 aa)    
Predicted Functional Partners:
HI_0586
Predicted coding region HI0586; Hypothetical protein; identified by GeneMark; putative.
     0.993
abgA
Hydrolase; Catalyzes the cleavage of p-aminobenzoyl-glutamate (PABA-GLU) to form p-aminobenzoate (PABA) and glutamate.
 
     0.867
dcuB
Anaerobic C4-dicarboxylate membrane transporter protein (dcuB); Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane; Belongs to the DcuA/DcuB transporter (TC 2.A.13.1) family.
  
   
 0.678
HI_0588
N-carbamyl-L-amino acid amidohydrolase; Similar to SP:P37113 GB:S67784 GB:X74289 PID:460895 SP:Q53389 percent identity: 35.94; identified by sequence similarity; putative; Belongs to the peptidase M20 family.
 
     0.604
pepE
Peptidase E (pepE); Hydrolyzes dipeptides containing N-terminal aspartate residues. May play a role in allowing the cell to use peptide aspartate to spare carbon otherwise required for the synthesis of the aspartate family of amino acids.
       0.566
dmsA
Anaerobic dimethyl sulfoxide reductase, chain A (dmsA); Catalyzes the reduction of dimethyl sulfoxide (DMSO) to dimethyl sulfide (DMS). The terminal DMSO reductase can also use various sulfoxides and N-oxide compounds as terminal electron acceptor in addition to DMSO (By similarity); Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
     0.477
dmsD
Conserved hypothetical protein; Required for biogenesis/assembly of DMSO reductase, but not for the interaction of the DmsA signal peptide with the Tat system. May be part of a chaperone cascade complex that facilitates a folding- maturation pathway for the substrate protein.
  
     0.465
ansB
L-asparaginase II (ansB); Similar to GB:M34234 SP:P00805 GB:M34277 PID:145277 PID:146597 percent identity: 70.52; identified by sequence similarity; putative; Belongs to the asparaginase 1 family.
  
   
 0.450
dmsC
Anaerobic dimethyl sulfoxide reductase, chain C (dmsC); Terminal reductase during anaerobic growth on various sulfoxide and N-oxide compounds. DmsC anchors the DmsAB dimer to the membrane and stabilizes it (By similarity).
  
     0.440
cpdB
2',3'-cyclic-nucleotide 2'-phosphodiesterase (cpdB); This bifunctional enzyme catalyzes two consecutive reactions during ribonucleic acid degradation. Converts a 2',3'-cyclic nucleotide to a 3'-nucleotide and then the 3'-nucleotide to the corresponding nucleoside and phosphate (By similarity).
       0.410
Your Current Organism:
Haemophilus influenzae
NCBI taxonomy Id: 71421
Other names: H. influenzae Rd KW20, Haemophilus influenzae KW20, Haemophilus influenzae Rd, Haemophilus influenzae Rd KW20
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