Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
HI_0633Predicted coding region HI0633; Hypothetical protein; identified by GeneMark; putative. (98 aa)    
Predicted Functional Partners:
dusA
Conserved hypothetical protein; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines. Specifically modifies U20 and U20a in tRNAs; Belongs to the Dus family. DusA subfamily.
       0.807
HI_1427
Predicted coding region HI1427; Hypothetical protein; identified by GeneMark; putative.
  
     0.593
HI_0552
Predicted coding region HI0552; Hypothetical protein; identified by GeneMark; putative.
  
     0.554
HI_0974
Predicted coding region HI0974; Hypothetical protein; identified by GeneMark; putative.
  
     0.551
HI_0632
Elongation factor Tu (tufB); Similar to GB:U00006 SP:P02990 GB:J01717 GB:M10459 GB:X57091 percent identity: 92.64; identified by sequence similarity; putative.
       0.422
HI_1119
Membrane protein (lapB); Similar to SP:P32181 GB:M59210 PID:387858 percent identity: 63.13; identified by sequence similarity; putative.
  
     0.418
Your Current Organism:
Haemophilus influenzae
NCBI taxonomy Id: 71421
Other names: H. influenzae Rd KW20, Haemophilus influenzae KW20, Haemophilus influenzae Rd, Haemophilus influenzae Rd KW20
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