STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
atoAAcetate CoA-transferase, beta subunit (atoA); Similar to GB:U00096 SP:P76459 PID:1736877 PID:1788552 percent identity: 70.14; identified by sequence similarity; putative. (223 aa)    
Predicted Functional Partners:
atoD
Acetate CoA-transferase, alpha subunit; Similar to GB:U00096 SP:P76458 PID:1736876 PID:1788551 percent identity: 63.13; identified by sequence similarity; putative.
 0.999
atoB
acetyl-CoA acetyltransferase (atoB); Similar to GB:U00096 SP:P76461 PID:1736879 PID:1788554 PID:1799573 percent identity: 66.92; identified by sequence similarity; putative.
  
 
 0.937
atoE
Short-chain fatty acids transporter (atoE); May be responsible for the uptake of short-chain fatty acids.
 
  
 0.874
leuA
2-isopropylmalate synthase (leuA); Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 1 subfamily.
  
 
 0.697
HI_1053
Conserved hypothetical protein; Similar to GB:M66060 SP:P27749 PID:141897 percent identity: 31.86; identified by sequence similarity; putative.
  
 
 0.654
HI_0082
Predicted coding region HI0082; Hypothetical protein; identified by GeneMark; putative.
  
 
 0.652
HI_0193
Esterase/lipase, putative; Similar to GB:U00096 PID:1786902 percent identity: 43.65; identified by sequence similarity; putative; Belongs to the DmpD/TodF/XylF esterase family.
  
 
 0.588
maeB
Malate oxidoreductase, putative; Similar to GB:U00096 PID:1788806 PID:1799885 PID:1799887 percent identity: 68.69; identified by sequence similarity; putative; In the C-terminal section; belongs to the phosphate acetyltransferase and butyryltransferase family.
  
 
 0.566
rpsC
Ribosomal protein S3 (rpS3); Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.
    
  0.535
HI_0775
Transcriptional regulator; Similar to GB:X73124 SP:P39592 PID:413948 GB:AL009126 percent identity: 30.80; identified by sequence similarity; putative; Belongs to the LysR transcriptional regulatory family.
       0.487
Your Current Organism:
Haemophilus influenzae
NCBI taxonomy Id: 71421
Other names: H. influenzae Rd KW20, Haemophilus influenzae KW20, Haemophilus influenzae Rd, Haemophilus influenzae Rd KW20
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.