Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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nrfDNitrite reductase, transmembrane protein (nrfD); Probably involved in the transfer of electrons from the quinone pool to the type-c cytochromes; Belongs to the NrfD family. (321 aa)    
Predicted Functional Partners:
nrfB
Nitrite reductase, cytochrome C-type protein (nrfB); Plays a role in nitrite reduction.
 
  
 0.981
nrfA
Nitrite reductase, cytochrome C552 (nrfA); Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process; Belongs to the cytochrome c-552 family.
 
  
 0.962
nrfC
Nitrite reductase, Fe-S protein (nrfC); Probably involved in the transfer of electrons from the quinone pool to the type-c cytochromes.
 
 
 0.948
napG
Ferredoxin-type protein (napG); Required for electron transfer from ubiquinol, via NapC, to the periplasmic nitrate reductase NapAB complex.
 
 
 0.769
napH
Ferredoxin-type protein (napH); Required for electron transfer from ubiquinol, via NapC, to the periplasmic nitrate reductase NapAB complex.
  
    0.716
torZ
Biotin sulfoxide reductase (bisC); Reduces trimethylamine-N-oxide (TMAO) into trimethylamine; an anaerobic reaction coupled to energy-yielding reactions.
 
  
 0.570
dmsA
Anaerobic dimethyl sulfoxide reductase, chain A (dmsA); Catalyzes the reduction of dimethyl sulfoxide (DMSO) to dimethyl sulfide (DMS). The terminal DMSO reductase can also use various sulfoxides and N-oxide compounds as terminal electron acceptor in addition to DMSO (By similarity); Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
  
 0.566
HI_1394
Conserved hypothetical protein; Similar to PID:887850 GB:U00096 SP:Q46828 PID:1789267 percent identity: 68.32; identified by sequence similarity; putative; Belongs to the UPF0267 family.
  
     0.564
dmsB
Anaerobic dimethyl sulfoxide reductase, chain B (dmsB); Electron transfer subunit of the terminal reductase during anaerobic growth on various sulfoxide and N-oxide compounds.
 
 
 0.474
HI_1075
Cytochrome D ubiquinol oxidase, subunit II (cydB); Probable cytochrome oxidase subunit; Belongs to the cytochrome ubiquinol oxidase subunit 2 family.
     
 0.473
Your Current Organism:
Haemophilus influenzae
NCBI taxonomy Id: 71421
Other names: H. influenzae Rd KW20, Haemophilus influenzae KW20, Haemophilus influenzae Rd, Haemophilus influenzae Rd KW20
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