Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
HI_1074Conserved hypothetical protein; Similar to GB:U00096 PID:1788090 percent identity: 51.37; identified by sequence similarity; putative. (150 aa)    
Predicted Functional Partners:
hrpA
ATP-dependent helicase (hrpa); Similar to SP:P43329 PID:806328 GB:U00096 PID:1742299 PID:1742304 percent identity: 70.29; identified by sequence similarity; putative.
       0.783
HI_1073
Conserved hypothetical protein; Similar to SP:P32065 GB:U01030 GB:X73413 PID:312767 PID:523332 percent identity: 43.55; identified by sequence similarity; putative.
       0.775
nrfA
Nitrite reductase, cytochrome C552 (nrfA); Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process; Belongs to the cytochrome c-552 family.
       0.468
HI_1376
Predicted coding region HI1376; Hypothetical protein; identified by GeneMark; putative.
  
     0.438
HI_1075
Cytochrome D ubiquinol oxidase, subunit II (cydB); Probable cytochrome oxidase subunit; Belongs to the cytochrome ubiquinol oxidase subunit 2 family.
       0.417
HI_1076
Cytochrome D ubiquinol oxidase, subunit I (cydA); Probable cytochrome oxidase subunit.
       0.405
Your Current Organism:
Haemophilus influenzae
NCBI taxonomy Id: 71421
Other names: H. influenzae Rd KW20, Haemophilus influenzae KW20, Haemophilus influenzae Rd, Haemophilus influenzae Rd KW20
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