STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HI_1333RNA-binding protein HI_1333; Similar to SP:P42550 PID:606118 GB:U00096 PID:1789570 percent identity: 75.00; identified by sequence similarity; putative (99 aa)    
Predicted Functional Partners:
rpsP
Ribosomal protein s16 (rps16); Belongs to the bacterial ribosomal protein bS16 family
   
  
 0.778
rlmE
Cell division protein (ftsj); Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit
  
  
 0.720
ccmB
Heme exporter protein b (ccmb); Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
      
 0.638
argR
Arginine repressor (argr); Regulates arginine biosynthesis genes
      
 0.576
fruA
Pts system, fructose-specific iibc component (frua); The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. The enzyme II FruAB PTS system is involved in fructose transport
       0.480
secG
Protein-export membrane protein (secg); Involved in protein export. Participates in an early event of protein translocation (By similarity)
 
    0.468
ftsH
Cell division protein (ftsh); Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
  
    0.464
Your Current Organism:
Haemophilus influenzae
NCBI taxonomy Id: 71421
Other names: H. influenzae Rd KW20, Haemophilus influenzae KW20, Haemophilus influenzae Rd, Haemophilus influenzae Rd KW20
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