Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
HI_1341Predicted coding region HI1341; Hypothetical protein; identified by GeneMark; putative. (203 aa)    
Predicted Functional Partners:
HI_1343
Predicted coding region HI1343; Hypothetical protein; identified by GeneMark; putative; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. Csd subfamily.
       0.773
HI_0725
Conserved hypothetical protein; Similar to PID:1685094 percent identity: 47.62; identified by sequence similarity; putative.
  
     0.696
HI_0173
Predicted coding region HI0173; Hypothetical protein; identified by GeneMark; putative.
  
     0.609
kdkA
Predicted coding region HI0260.1; Catalyzes the ATP-dependent phosphorylation of the 3-deoxy-D- manno-octulosonic acid (Kdo) residue in Kdo-lipid IV(A) at the 4-OH position. To a lesser extent, can use GTP instead of ATP as substrate.
  
     0.597
uup-B
ABC transporter, ATP-binding protein; Might play a role in ribosome assembly or function; this is missing the first ABC transporter domain compared to paralogs.
       0.572
HI_0894
Lipoprotein, putative; Similar to GB:U14993 SP:P43505 PID:438192 PID:550460 percent identity: 30.92; identified by sequence similarity; putative.
  
     0.506
HI_1340
Conserved hypothetical protein; Similar to PID:882689 GB:U00096 SP:Q46920 PID:1789158 percent identity: 58.08; identified by sequence similarity; putative; Belongs to the outer membrane factor (OMF) (TC 1.B.17) family.
       0.502
HI_1488
E16 protein, putative; Similar to PID:215574 percent identity: 29.53; identified by sequence similarity; putative; To phage Mu protein gp16.
  
     0.490
HI_1681
Conserved hypothetical protein; Similar to GB:U00096 PID:1787198 percent identity: 26.85; identified by sequence similarity; putative; Belongs to the UPF0319 family.
  
     0.489
HI_0523
Conserved hypothetical protein; Similar to GB:AE000511 PID:2314449 percent identity: 36.28; identified by sequence similarity; putative; Belongs to the glycosyltransferase 9 family.
  
     0.485
Your Current Organism:
Haemophilus influenzae
NCBI taxonomy Id: 71421
Other names: H. influenzae Rd KW20, Haemophilus influenzae KW20, Haemophilus influenzae Rd, Haemophilus influenzae Rd KW20
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