Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
HI_1400 | HI_1402 | HI_1400 | HI_1402 | Conserved hypothetical protein; Efficiently catalyzes the hydrolysis of the 3'-phosphate from 3',5'-bis-phosphonucleotides as well as the successive hydrolysis of 5'-phosphomononucleotides from the 5'-end of short pieces of RNA and DNA, with no specificity toward the identity of the nucleotide base. Is more efficient at hydrolyzing RNA oligonucleotides than DNA oligonucleotides. This enzyme can also hydrolyze annealed DNA duplexes, albeit at a catalytic efficiency lower than that of the corresponding single-stranded oligonucleotides. | Predicted coding region HI1402; Hypothetical protein; identified by GeneMark; putative. | 0.431 |
HI_1400 | pyrD | HI_1400 | HI_1401 | Conserved hypothetical protein; Efficiently catalyzes the hydrolysis of the 3'-phosphate from 3',5'-bis-phosphonucleotides as well as the successive hydrolysis of 5'-phosphomononucleotides from the 5'-end of short pieces of RNA and DNA, with no specificity toward the identity of the nucleotide base. Is more efficient at hydrolyzing RNA oligonucleotides than DNA oligonucleotides. This enzyme can also hydrolyze annealed DNA duplexes, albeit at a catalytic efficiency lower than that of the corresponding single-stranded oligonucleotides. | Dihydroorotate dehydrogenase (pyrD); Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. | 0.775 |
HI_1402 | HI_1400 | HI_1402 | HI_1400 | Predicted coding region HI1402; Hypothetical protein; identified by GeneMark; putative. | Conserved hypothetical protein; Efficiently catalyzes the hydrolysis of the 3'-phosphate from 3',5'-bis-phosphonucleotides as well as the successive hydrolysis of 5'-phosphomononucleotides from the 5'-end of short pieces of RNA and DNA, with no specificity toward the identity of the nucleotide base. Is more efficient at hydrolyzing RNA oligonucleotides than DNA oligonucleotides. This enzyme can also hydrolyze annealed DNA duplexes, albeit at a catalytic efficiency lower than that of the corresponding single-stranded oligonucleotides. | 0.431 |
HI_1402 | HI_1403 | HI_1402 | HI_1403 | Predicted coding region HI1402; Hypothetical protein; identified by GeneMark; putative. | Predicted coding region HI1403; Hypothetical protein; identified by GeneMark; putative. | 0.671 |
HI_1402 | HI_1404 | HI_1402 | HI_1404 | Predicted coding region HI1402; Hypothetical protein; identified by GeneMark; putative. | Predicted coding region HI1404; Hypothetical protein; identified by GeneMark; putative. | 0.728 |
HI_1402 | pyrD | HI_1402 | HI_1401 | Predicted coding region HI1402; Hypothetical protein; identified by GeneMark; putative. | Dihydroorotate dehydrogenase (pyrD); Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. | 0.431 |
HI_1403 | HI_1402 | HI_1403 | HI_1402 | Predicted coding region HI1403; Hypothetical protein; identified by GeneMark; putative. | Predicted coding region HI1402; Hypothetical protein; identified by GeneMark; putative. | 0.671 |
HI_1403 | HI_1404 | HI_1403 | HI_1404 | Predicted coding region HI1403; Hypothetical protein; identified by GeneMark; putative. | Predicted coding region HI1404; Hypothetical protein; identified by GeneMark; putative. | 0.671 |
HI_1404 | HI_1402 | HI_1404 | HI_1402 | Predicted coding region HI1404; Hypothetical protein; identified by GeneMark; putative. | Predicted coding region HI1402; Hypothetical protein; identified by GeneMark; putative. | 0.728 |
HI_1404 | HI_1403 | HI_1404 | HI_1403 | Predicted coding region HI1404; Hypothetical protein; identified by GeneMark; putative. | Predicted coding region HI1403; Hypothetical protein; identified by GeneMark; putative. | 0.671 |
pyrD | HI_1400 | HI_1401 | HI_1400 | Dihydroorotate dehydrogenase (pyrD); Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. | Conserved hypothetical protein; Efficiently catalyzes the hydrolysis of the 3'-phosphate from 3',5'-bis-phosphonucleotides as well as the successive hydrolysis of 5'-phosphomononucleotides from the 5'-end of short pieces of RNA and DNA, with no specificity toward the identity of the nucleotide base. Is more efficient at hydrolyzing RNA oligonucleotides than DNA oligonucleotides. This enzyme can also hydrolyze annealed DNA duplexes, albeit at a catalytic efficiency lower than that of the corresponding single-stranded oligonucleotides. | 0.775 |
pyrD | HI_1402 | HI_1401 | HI_1402 | Dihydroorotate dehydrogenase (pyrD); Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. | Predicted coding region HI1402; Hypothetical protein; identified by GeneMark; putative. | 0.431 |