Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
HI_1409Predicted coding region HI1409; Hypothetical protein; identified by GeneMark; putative. (436 aa)    
Predicted Functional Partners:
HI_1407
traN-related protein; Similar to GB:L10330 PID:437700 percent identity: 40.17; identified by sequence similarity; putative; To E.coli plasmid IncP-alpha RP4 protein TraN.
 
   
 0.971
HI_1405
Predicted coding region HI1405; Hypothetical protein; identified by GeneMark; putative.
 
   
 0.896
HI_1410
Predicted coding region HI1410; Hypothetical protein; identified by GeneMark; putative.
     
 0.876
HI_1624
Predicted coding region HI1624; Hypothetical protein; identified by GeneMark; putative.
  
     0.762
HI_0162
Lipoprotein, putative; Similar to GB:U00096 PID:1773118 PID:1786637 percent identity: 25.82; identified by sequence similarity; putative.
  
     0.756
HI_1217
Transferrin-binding protein, putative; Probable receptor, TonB-dependent.
  
     0.755
HI_1369
Conserved hypothetical protein; Similar to SP:P31827 GB:X71917 PID:311346 GB:U00096 PID:1787771 percent identity: 25.46; identified by sequence similarity; putative; To E.coli YddB.
  
     0.754
oapA
Opacity associated protein (oapA); Cell envelope protein involved in phase variation, confers opaque colony phenotype; Belongs to the OapA family.
  
     0.749
HI_1697
Lipopolysaccharide biosynthesis protein, putative; Similar to GB:U05670 percent identity: 28.57; identified by sequence similarity; putative; Belongs to the glycosyltransferase 25 family.
  
     0.734
HI_0896
Cell division protein (ftsN); Similar to GB:L19201 SP:P29131 GB:L14281 PID:290448 PID:305036 percent identity: 29.08; identified by sequence similarity; putative; To E.coli FtsN repeat regions.
  
     0.710
Your Current Organism:
Haemophilus influenzae
NCBI taxonomy Id: 71421
Other names: H. influenzae Rd KW20, Haemophilus influenzae KW20, Haemophilus influenzae Rd, Haemophilus influenzae Rd KW20
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