Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
HI_1414Predicted coding region HI1414; Hypothetical protein; identified by GeneMark; putative. (91 aa)    
Predicted Functional Partners:
HI_1413
Predicted coding region HI1413; Hypothetical protein; identified by GeneMark; putative.
       0.773
HI_1415
Predicted coding region HI1415; Hypothetical protein; identified by GeneMark; putative; Belongs to the glycosyl hydrolase 19 family.
       0.773
HI_1416
Predicted coding region HI1416; Hypothetical protein; identified by GeneMark; putative.
       0.773
HI_1412
Conserved hypothetical protein; Similar to SP:P21417 PID:1196685 percent identity: 31.79; identified by sequence similarity; putative.
       0.497
HI_1411
Terminase, small subunit; Similar to SP:Q38627 PID:522116 percent identity: 32.31; identified by sequence similarity; putative.
       0.496
Your Current Organism:
Haemophilus influenzae
NCBI taxonomy Id: 71421
Other names: H. influenzae Rd KW20, Haemophilus influenzae KW20, Haemophilus influenzae Rd, Haemophilus influenzae Rd KW20
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