Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
HI_1456Predicted coding region HI1456; Hypothetical protein; identified by GeneMark; putative. (168 aa)    
Predicted Functional Partners:
HI_1457
Opacity protein, putative; Similar to PID:2367659 percent identity: 34.32; identified by sequence similarity; putative; Belongs to the opacity porin family.
       0.773
HI_1504
I protein (muI); Potential protease involved in virion morphogenesis.
  
     0.635
HI_1514
Predicted coding region HI1514; Hypothetical protein; identified by GeneMark; putative.
  
     0.611
HI_1508
Conserved hypothetical protein; Similar to PID:2353778 percent identity: 80.53; identified by sequence similarity; putative; To phage Mu protein gp36.
  
     0.610
HI_1501
Predicted coding region HI1501; Hypothetical protein; identified by GeneMark; putative; To phage Mu protein gp29.
  
     0.603
HI_1571
Predicted coding region HI1571; Hypothetical protein; identified by GeneMark; putative.
  
     0.595
HI_1499
Predicted coding region HI1499; Hypothetical protein; identified by GeneMark; putative; To phage Mu protein gp27.
  
     0.566
HI_1505
Predicted coding region HI1505; Hypothetical protein; identified by GeneMark; putative; To phage Mu protein T.
  
     0.543
HI_1500
Predicted coding region HI1500; Hypothetical protein; identified by GeneMark; putative; To phage Mu protein gp28.
  
     0.503
HI_1498.1
Predicted coding region HI1498.1; Brute Force ORF; identified by GeneMark; putative.
  
     0.476
Your Current Organism:
Haemophilus influenzae
NCBI taxonomy Id: 71421
Other names: H. influenzae Rd KW20, Haemophilus influenzae KW20, Haemophilus influenzae Rd, Haemophilus influenzae Rd KW20
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