Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
HI_1481DNA transposition protein (muB); This protein is a non-specific DNA-binding and ATP- hydrolyzing protein essential for bacteriophage integration and replication. (287 aa)    
Predicted Functional Partners:
HI_1478
Transposase (muA); This transposase is essential for integration, replication- transposition, and excision of Mu-like viral DNA.
 
 
 0.973
nlp
DNA-binding protein (ner); Negative regulator of transcription starting from the Pe and Pc promoters of Mu. Also negatively regulates its own gene transcription (By similarity).
 
   
 0.888
HI_1501
Predicted coding region HI1501; Hypothetical protein; identified by GeneMark; putative; To phage Mu protein gp29.
 
   
 0.874
HI_1505
Predicted coding region HI1505; Hypothetical protein; identified by GeneMark; putative; To phage Mu protein T.
 
  
 0.872
HI_1514
Predicted coding region HI1514; Hypothetical protein; identified by GeneMark; putative.
  
   
 0.847
HI_1483
Host-nuclease inhibitor protein (gam); Protects linear double-stranded DNA of Mu genome from exonuclease degradation.
 
     0.841
HI_1488
E16 protein, putative; Similar to PID:215574 percent identity: 29.53; identified by sequence similarity; putative; To phage Mu protein gp16.
 
    0.790
HI_1500
Predicted coding region HI1500; Hypothetical protein; identified by GeneMark; putative; To phage Mu protein gp28.
 
     0.784
HI_1499
Predicted coding region HI1499; Hypothetical protein; identified by GeneMark; putative; To phage Mu protein gp27.
 
     0.778
HI_1502
Predicted coding region HI1502; Involved in virion morphogenesis.
 
     0.776
Your Current Organism:
Haemophilus influenzae
NCBI taxonomy Id: 71421
Other names: H. influenzae Rd KW20, Haemophilus influenzae KW20, Haemophilus influenzae Rd, Haemophilus influenzae Rd KW20
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