Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
HI_1496Predicted coding region HI1496; Hypothetical protein; identified by GeneMark; putative. (84 aa)    
Predicted Functional Partners:
HI_1495
Predicted coding region HI1495; Hypothetical protein; identified by GeneMark; putative.
       0.774
HI_1493
Predicted coding region HI1493; Hypothetical protein; identified by GeneMark; putative.
       0.773
HI_1494
N-acetylmuramoyl-L-alanine amidase; Similar to SP:P20331 PID:15695 percent identity: 43.88; identified by sequence similarity; putative; To phage T3 and T7 N-acetylmuramoyl-L-alanine amidases.
       0.773
HI_1492
Predicted coding region HI1492; Hypothetical protein; identified by GeneMark; putative.
       0.551
HI_1490
Positive regulator of late transcription {Bacteriophage mu); Similar to SP:P06022 PID:15812 PID:215521 PID:215582 percent identity: 44.26; identified by sequence similarity; putative.
       0.547
HI_1491
DNA-binding protein, putative; Required for transcription of the phage late genes.
       0.547
HI_1497
Conserved hypothetical protein; Similar to SP:Q06424 PID:288658 percent identity: 36.21; identified by sequence similarity; putative.
       0.505
HI_1498
Predicted coding region HI1498; Hypothetical protein; identified by GeneMark; putative.
       0.505
HI_1498.1
Predicted coding region HI1498.1; Brute Force ORF; identified by GeneMark; putative.
       0.505
HI_1499
Predicted coding region HI1499; Hypothetical protein; identified by GeneMark; putative; To phage Mu protein gp27.
       0.492
Your Current Organism:
Haemophilus influenzae
NCBI taxonomy Id: 71421
Other names: H. influenzae Rd KW20, Haemophilus influenzae KW20, Haemophilus influenzae Rd, Haemophilus influenzae Rd KW20
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