Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
HI_1504I protein (muI); Potential protease involved in virion morphogenesis. (355 aa)    
Predicted Functional Partners:
HI_1505
Predicted coding region HI1505; Hypothetical protein; identified by GeneMark; putative; To phage Mu protein T.
 
  
 0.962
HI_1508
Conserved hypothetical protein; Similar to PID:2353778 percent identity: 80.53; identified by sequence similarity; putative; To phage Mu protein gp36.
 
     0.877
HI_1501
Predicted coding region HI1501; Hypothetical protein; identified by GeneMark; putative; To phage Mu protein gp29.
 
    0.857
HI_1502
Predicted coding region HI1502; Involved in virion morphogenesis.
 
    0.844
HI_1500
Predicted coding region HI1500; Hypothetical protein; identified by GeneMark; putative; To phage Mu protein gp28.
 
     0.842
HI_1511
Sheath protein gpL (muL); Major component of the tail.
 
     0.839
HI_1499
Predicted coding region HI1499; Hypothetical protein; identified by GeneMark; putative; To phage Mu protein gp27.
 
     0.831
HI_1498.1
Predicted coding region HI1498.1; Brute Force ORF; identified by GeneMark; putative.
 
     0.829
HI_1514
Predicted coding region HI1514; Hypothetical protein; identified by GeneMark; putative.
 
     0.826
HI_1515
64 kDa virion protein (muN); Similar to SP:P08557 PID:15105 percent identity: 31.48; identified by sequence similarity; putative; To phage Mu protein N.
 
     0.793
Your Current Organism:
Haemophilus influenzae
NCBI taxonomy Id: 71421
Other names: H. influenzae Rd KW20, Haemophilus influenzae KW20, Haemophilus influenzae Rd, Haemophilus influenzae Rd KW20
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