STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
HI_1518Predicted coding region HI1518; Hypothetical protein; identified by GeneMark; putative; To phage Mu protein gp45. (182 aa)    
Predicted Functional Partners:
HI_1519
Predicted coding region HI1519; Hypothetical protein; identified by GeneMark; putative; To phage Mu protein gp46.
 
    0.955
HI_1520
Conserved hypothetical protein; Similar to GB:U00096 PID:1787398 percent identity: 33.47; identified by sequence similarity; putative; Belongs to the Mu gp47/PBSX XkdT family.
 
    0.950
HI_1521
Conserved hypothetical protein; Similar to GB:U00096 PID:1787399 percent identity: 27.37; identified by sequence similarity; putative; To phage Mu protein gp48 an E.coli YmfQ.
 
    0.902
HI_1515
64 kDa virion protein (muN); Similar to SP:P08557 PID:15105 percent identity: 31.48; identified by sequence similarity; putative; To phage Mu protein N.
 
    0.810
HI_1511
Sheath protein gpL (muL); Major component of the tail.
 
    0.789
HI_1478
Transposase (muA); This transposase is essential for integration, replication- transposition, and excision of Mu-like viral DNA.
  
     0.761
HI_1488
E16 protein, putative; Similar to PID:215574 percent identity: 29.53; identified by sequence similarity; putative; To phage Mu protein gp16.
  
    0.750
HI_1498.1
Predicted coding region HI1498.1; Brute Force ORF; identified by GeneMark; putative.
  
     0.750
HI_1502
Predicted coding region HI1502; Involved in virion morphogenesis.
  
     0.735
HI_1481
DNA transposition protein (muB); This protein is a non-specific DNA-binding and ATP- hydrolyzing protein essential for bacteriophage integration and replication.
  
     0.726
Your Current Organism:
Haemophilus influenzae
NCBI taxonomy Id: 71421
Other names: H. influenzae Rd KW20, Haemophilus influenzae KW20, Haemophilus influenzae Rd, Haemophilus influenzae Rd KW20
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.