Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
HI_1562Predicted coding region HI1562; Hypothetical protein; identified by GeneMark; putative. (52 aa)    
Predicted Functional Partners:
HI_1265
Conserved hypothetical protein; Similar to GB:U00096 SP:P75838 PID:1787133 percent identity: 66.90; identified by sequence similarity; putative.
  
  
 0.731
prfA
Peptide chain release factor 1 (prfA); Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA.
       0.519
HI_1558
Conserved hypothetical protein; Similar to SP:P20101 GB:X05552 PID:41872 PID:1008040 GB:U00096 percent identity: 40.83; identified by sequence similarity; putative; Belongs to the UPF0162 family.
       0.481
prmC
hemK protein (hemK); Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily.
       0.481
HI_1560
Predicted coding region HI1560; Hypothetical protein; identified by GeneMark; putative.
       0.481
kdsA
2-dehydro-3-deoxyphosphooctonate aldolase (kdsA); Similar to SP:P17579 GB:X05552 PID:940498 PID:968934 GB:U00096 percent identity: 81.63; identified by sequence similarity; putative; Belongs to the KdsA family.
       0.466
epmC
Conserved hypothetical protein; Is involved in the final hydroxylation step of the post- translational modification of translation elongation factor P (EF-P) on 'Lys-34'. Acts after beta-lysylation of 'Lys-34' by EpmA and EpmB. EpmC adds an oxygen atom to the C5 position of 'Lys-34' and does not modify the added beta-lysine (By similarity).
       0.422
HI_1556
2-hydroxyacid dehydrogenase; Similar to GB:AE000511 PID:2313177 percent identity: 41.64; identified by sequence similarity; putative; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
  
    0.401
Your Current Organism:
Haemophilus influenzae
NCBI taxonomy Id: 71421
Other names: H. influenzae Rd KW20, Haemophilus influenzae KW20, Haemophilus influenzae Rd, Haemophilus influenzae Rd KW20
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