STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LSA_02390Hypothetical protein. (135 aa)    
Predicted Functional Partners:
LSA_02380
Hypothetical protein.
 
     0.770
LSA_06500
Hypothetical protein.
  
    0.762
LSA_07190
Hypothetical protein.
  
     0.754
LSA_02020
Hypothetical protein.
  
     0.753
LSA_07260
Hypothetical protein.
  
 
 0.745
LSA_03180
Hypothetical protein.
  
    0.738
LSA_07940
Hypothetical protein.
  
     0.738
LSA_10440
Hypothetical protein.
  
     0.670
LSA_12280
Hypothetical protein.
  
     0.653
LSA_11680
Hypothetical protein.
  
     0.623
Your Current Organism:
Lactobacillus sanfranciscensis
NCBI taxonomy Id: 714313
Other names: L. sanfranciscensis TMW 1.1304, Lactobacillus sanfranciscensis TMW 1.1304
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.