Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GCA_000516535_00338 | JCM16774_0324 | GCA_000516535_00338 | GCA_000516535_00336 | Unannotated protein. | Unannotated protein. | 0.552 |
GCA_000516535_00338 | JCM16774_0325 | GCA_000516535_00338 | GCA_000516535_00337 | Unannotated protein. | Unannotated protein. | 0.563 |
GCA_000516535_00338 | JCM16774_0326 | GCA_000516535_00338 | GCA_000516535_00339 | Unannotated protein. | Unannotated protein. | 0.752 |
GCA_000516535_00338 | JCM16774_0327 | GCA_000516535_00338 | GCA_000516535_00340 | Unannotated protein. | Unannotated protein; Nuclease required for the repair of DNA interstrand cross- links (ICL). Acts as a 5'-3' exonuclease that anchors at a cut end of DNA and cleaves DNA successively at every third nucleotide, allowing to excise an ICL from one strand through flanking incisions. Belongs to the FAN1 family. | 0.752 |
GCA_000516535_00338 | JCM16774_0328 | GCA_000516535_00338 | GCA_000516535_00341 | Unannotated protein. | Unannotated protein. | 0.552 |
JCM16774_0323 | JCM16774_0324 | GCA_000516535_00335 | GCA_000516535_00336 | Unannotated protein. | Unannotated protein. | 0.438 |
JCM16774_0323 | JCM16774_0325 | GCA_000516535_00335 | GCA_000516535_00337 | Unannotated protein. | Unannotated protein. | 0.431 |
JCM16774_0324 | GCA_000516535_00338 | GCA_000516535_00336 | GCA_000516535_00338 | Unannotated protein. | Unannotated protein. | 0.552 |
JCM16774_0324 | JCM16774_0323 | GCA_000516535_00336 | GCA_000516535_00335 | Unannotated protein. | Unannotated protein. | 0.438 |
JCM16774_0324 | JCM16774_0325 | GCA_000516535_00336 | GCA_000516535_00337 | Unannotated protein. | Unannotated protein. | 0.757 |
JCM16774_0324 | JCM16774_0326 | GCA_000516535_00336 | GCA_000516535_00339 | Unannotated protein. | Unannotated protein. | 0.538 |
JCM16774_0324 | JCM16774_0327 | GCA_000516535_00336 | GCA_000516535_00340 | Unannotated protein. | Unannotated protein; Nuclease required for the repair of DNA interstrand cross- links (ICL). Acts as a 5'-3' exonuclease that anchors at a cut end of DNA and cleaves DNA successively at every third nucleotide, allowing to excise an ICL from one strand through flanking incisions. Belongs to the FAN1 family. | 0.538 |
JCM16774_0324 | JCM16774_0328 | GCA_000516535_00336 | GCA_000516535_00341 | Unannotated protein. | Unannotated protein. | 0.407 |
JCM16774_0325 | GCA_000516535_00338 | GCA_000516535_00337 | GCA_000516535_00338 | Unannotated protein. | Unannotated protein. | 0.563 |
JCM16774_0325 | JCM16774_0323 | GCA_000516535_00337 | GCA_000516535_00335 | Unannotated protein. | Unannotated protein. | 0.431 |
JCM16774_0325 | JCM16774_0324 | GCA_000516535_00337 | GCA_000516535_00336 | Unannotated protein. | Unannotated protein. | 0.757 |
JCM16774_0325 | JCM16774_0326 | GCA_000516535_00337 | GCA_000516535_00339 | Unannotated protein. | Unannotated protein. | 0.548 |
JCM16774_0325 | JCM16774_0327 | GCA_000516535_00337 | GCA_000516535_00340 | Unannotated protein. | Unannotated protein; Nuclease required for the repair of DNA interstrand cross- links (ICL). Acts as a 5'-3' exonuclease that anchors at a cut end of DNA and cleaves DNA successively at every third nucleotide, allowing to excise an ICL from one strand through flanking incisions. Belongs to the FAN1 family. | 0.548 |
JCM16774_0325 | JCM16774_0328 | GCA_000516535_00337 | GCA_000516535_00341 | Unannotated protein. | Unannotated protein. | 0.414 |
JCM16774_0326 | GCA_000516535_00338 | GCA_000516535_00339 | GCA_000516535_00338 | Unannotated protein. | Unannotated protein. | 0.752 |
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