STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JCM16774_1466Unannotated protein. (830 aa)    
Predicted Functional Partners:
JCM16774_1809
Unannotated protein.
  
 
 0.879
JCM16774_0204
Unannotated protein.
   
 0.661
JCM16774_1013
Unannotated protein.
   
 0.661
gmk
Unannotated protein; Essential for recycling GMP and indirectly, cGMP.
   
  0.648
pyrD
Unannotated protein; Catalyzes the conversion of dihydroorotate to orotate.
  
  
 0.630
lpdA
Unannotated protein.
  
  
 0.617
JCM16774_0035
Unannotated protein.
 
 
0.599
JCM16774_0822
Unannotated protein.
  
 0.599
JCM16774_1259
Unannotated protein.
  
 0.599
GCA_000516535_01267
Unannotated protein.
  
 0.599
Your Current Organism:
Leptotrichia goodfellowii
NCBI taxonomy Id: 714315
Other names: L. goodfellowii DSM 19756, Leptotrichia goodfellowii DSM 19756, Leptotrichia goodfellowii LB57, Leptotrichia goodfellowii str. DSM 19756, Leptotrichia goodfellowii strain DSM 19756, Leptotrichia sp. LB57
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.