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The next version of STRING is ready for use in your analyses: updated networks across STRING newly available directed regulatory networks a new typed view showing functional, physical, and regulatory edges in one network new clustering options and cluster-based layouts … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OJG63663.1Hypothetical protein. (247 aa)    
Predicted Functional Partners:
OJG63664.1
Hypothetical protein.
 
    0.959
OJG63662.1
Hypothetical protein.
 
 
 0.957
OJG63665.1
Hypothetical protein.
 
     0.880
OJG65584.1
Teichoic acid ABC transporter permease.
    
  0.668
OJG59989.1
Hypothetical protein.
 
 
 0.654
OJG59596.1
Hypothetical protein.
 
 
 0.649
OJG59980.1
Hypothetical protein.
 
 
 0.612
OJG65088.1
Nitroreductase.
  
  
 0.596
OJG63627.1
Hypothetical protein.
  
  
 0.589
OJG64455.1
Hypothetical protein; Belongs to the flavin oxidoreductase frp family.
  
  
 0.589
Your Current Organism:
Enterococcus malodoratus
NCBI taxonomy Id: 71451
Other names: ATCC 43197, CCUG 30572, CIP 103012, DSM 20681, E. malodoratus, JCM 8730, LMG 10747, LMG:10747, NBRC 100489, NCDO 846, NCIMB 700846, NCTC 12365, Streptococcus faecalis subsp. malodoratus
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