Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OJG57062.1 | OJG62565.1 | RV07_GL003664 | RV07_GL001336 | 6-phosphogluconate dehydrogenase, decarboxylating; Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH. | Gluconate 5-dehydrogenase. | 0.847 |
OJG57062.1 | OJG64695.1 | RV07_GL003664 | RV07_GL004071 | 6-phosphogluconate dehydrogenase, decarboxylating; Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH. | Hypothetical protein. | 0.873 |
OJG57062.1 | OJG65606.1 | RV07_GL003664 | RV07_GL002476 | 6-phosphogluconate dehydrogenase, decarboxylating; Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH. | Hypothetical protein. | 0.545 |
OJG57778.1 | OJG62565.1 | RV07_GL003251 | RV07_GL001336 | Pyruvate:ferredoxin (flavodoxin) oxidoreductase. | Gluconate 5-dehydrogenase. | 0.934 |
OJG57778.1 | OJG64533.1 | RV07_GL003251 | RV07_GL004235 | Pyruvate:ferredoxin (flavodoxin) oxidoreductase. | Pyruvate:ferredoxin (flavodoxin) oxidoreductase. | 0.999 |
OJG57778.1 | OJG64695.1 | RV07_GL003251 | RV07_GL004071 | Pyruvate:ferredoxin (flavodoxin) oxidoreductase. | Hypothetical protein. | 0.934 |
OJG57778.1 | OJG65530.1 | RV07_GL003251 | RV07_GL002400 | Pyruvate:ferredoxin (flavodoxin) oxidoreductase. | Beta-ketoacyl-acyl-carrier-protein synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. | 0.963 |
OJG57778.1 | OJG65532.1 | RV07_GL003251 | RV07_GL002402 | Pyruvate:ferredoxin (flavodoxin) oxidoreductase. | Malonyl CoA-acyl carrier protein transacylase. | 0.875 |
OJG57778.1 | OJG65606.1 | RV07_GL003251 | RV07_GL002476 | Pyruvate:ferredoxin (flavodoxin) oxidoreductase. | Hypothetical protein. | 0.987 |
OJG62565.1 | OJG57062.1 | RV07_GL001336 | RV07_GL003664 | Gluconate 5-dehydrogenase. | 6-phosphogluconate dehydrogenase, decarboxylating; Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH. | 0.847 |
OJG62565.1 | OJG57778.1 | RV07_GL001336 | RV07_GL003251 | Gluconate 5-dehydrogenase. | Pyruvate:ferredoxin (flavodoxin) oxidoreductase. | 0.934 |
OJG62565.1 | OJG62567.1 | RV07_GL001336 | RV07_GL001338 | Gluconate 5-dehydrogenase. | 2-dehydro-3-deoxygluconokinase. | 0.928 |
OJG62565.1 | OJG64533.1 | RV07_GL001336 | RV07_GL004235 | Gluconate 5-dehydrogenase. | Pyruvate:ferredoxin (flavodoxin) oxidoreductase. | 0.934 |
OJG62565.1 | OJG64695.1 | RV07_GL001336 | RV07_GL004071 | Gluconate 5-dehydrogenase. | Hypothetical protein. | 0.841 |
OJG62565.1 | OJG65530.1 | RV07_GL001336 | RV07_GL002400 | Gluconate 5-dehydrogenase. | Beta-ketoacyl-acyl-carrier-protein synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. | 0.844 |
OJG62565.1 | OJG65532.1 | RV07_GL001336 | RV07_GL002402 | Gluconate 5-dehydrogenase. | Malonyl CoA-acyl carrier protein transacylase. | 0.841 |
OJG62565.1 | OJG65606.1 | RV07_GL001336 | RV07_GL002476 | Gluconate 5-dehydrogenase. | Hypothetical protein. | 0.884 |
OJG62565.1 | kduI | RV07_GL001336 | RV07_GL001337 | Gluconate 5-dehydrogenase. | 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase 2; Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate. Belongs to the KduI family. | 0.970 |
OJG62565.1 | uxuA | RV07_GL001336 | RV07_GL001035 | Gluconate 5-dehydrogenase. | Mannonate dehydratase; Catalyzes the dehydration of D-mannonate. | 0.889 |
OJG62567.1 | OJG62565.1 | RV07_GL001338 | RV07_GL001336 | 2-dehydro-3-deoxygluconokinase. | Gluconate 5-dehydrogenase. | 0.928 |
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