STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OJG86544.1Hypothetical protein. (206 aa)    
Predicted Functional Partners:
OJG81754.1
Cof-like hydrolase.
 
     0.649
OJG86543.1
Hypothetical protein.
       0.631
OJG86545.1
Rod shape determining protein RodA; Belongs to the SEDS family.
  
    0.622
OJG84844.1
Branched-chain amino acid transport.
  
     0.572
OJG86546.1
Arsenate reductase; Belongs to the ArsC family.
       0.473
OJG85171.1
Hypothetical protein.
  
     0.443
OJG86547.1
Hypothetical protein.
       0.427
OJG83395.1
Hypothetical protein.
  
     0.412
OJG85962.1
MerR family transcriptional regulator.
  
     0.401
Your Current Organism:
Enterococcus raffinosus
NCBI taxonomy Id: 71452
Other names: ATCC 49427, CCUG 29292, CIP 103329, DSM 5633, E. raffinosus, JCM 8733, LMG 12888, LMG:12888, NBRC 100492, NCIMB 12901, NCTC 12192
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.