Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OJG85583.1 | OJG86630.1 | RV13_GL000929 | RV13_GL000276 | RinA family phage transcriptional regulator. | Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family. | 0.896 |
OJG85583.1 | OJG86631.1 | RV13_GL000929 | RV13_GL000277 | RinA family phage transcriptional regulator. | dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family. | 0.895 |
OJG85583.1 | OJG86633.1 | RV13_GL000929 | RV13_GL000279 | RinA family phage transcriptional regulator. | dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose. | 0.886 |
OJG85583.1 | OJG86647.1 | RV13_GL000929 | RV13_GL000293 | RinA family phage transcriptional regulator. | Hypothetical protein. | 0.723 |
OJG85583.1 | OJG86652.1 | RV13_GL000929 | RV13_GL000298 | RinA family phage transcriptional regulator. | UDP-glucose 4-epimerase. | 0.601 |
OJG85583.1 | OJG87699.1 | RV13_GL000929 | RV13_GL003505 | RinA family phage transcriptional regulator. | Hypothetical protein. | 0.601 |
OJG85583.1 | OJG88302.1 | RV13_GL000929 | RV13_GL002622 | RinA family phage transcriptional regulator. | NAD-dependent nucleoside-diphosphate-sugar epimerase. | 0.601 |
OJG86628.1 | OJG86630.1 | RV13_GL000274 | RV13_GL000276 | Hypothetical protein. | Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family. | 0.788 |
OJG86628.1 | OJG86631.1 | RV13_GL000274 | RV13_GL000277 | Hypothetical protein. | dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family. | 0.884 |
OJG86628.1 | OJG86632.1 | RV13_GL000274 | RV13_GL000278 | Hypothetical protein. | dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily. | 0.691 |
OJG86628.1 | OJG86633.1 | RV13_GL000274 | RV13_GL000279 | Hypothetical protein. | dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose. | 0.784 |
OJG86628.1 | OJG86634.1 | RV13_GL000274 | RV13_GL000280 | Hypothetical protein. | Hypothetical protein. | 0.855 |
OJG86628.1 | OJG86647.1 | RV13_GL000274 | RV13_GL000293 | Hypothetical protein. | Hypothetical protein. | 0.655 |
OJG86628.1 | OJG86652.1 | RV13_GL000274 | RV13_GL000298 | Hypothetical protein. | UDP-glucose 4-epimerase. | 0.593 |
OJG86628.1 | OJG87699.1 | RV13_GL000274 | RV13_GL003505 | Hypothetical protein. | Hypothetical protein. | 0.546 |
OJG86628.1 | OJG88302.1 | RV13_GL000274 | RV13_GL002622 | Hypothetical protein. | NAD-dependent nucleoside-diphosphate-sugar epimerase. | 0.548 |
OJG86630.1 | OJG85583.1 | RV13_GL000276 | RV13_GL000929 | Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family. | RinA family phage transcriptional regulator. | 0.896 |
OJG86630.1 | OJG86628.1 | RV13_GL000276 | RV13_GL000274 | Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family. | Hypothetical protein. | 0.788 |
OJG86630.1 | OJG86631.1 | RV13_GL000276 | RV13_GL000277 | Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family. | dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family. | 0.999 |
OJG86630.1 | OJG86632.1 | RV13_GL000276 | RV13_GL000278 | Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family. | dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily. | 0.999 |
page 1 of 5