STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OJG86662.1HesB-like protein. (97 aa)    
Predicted Functional Partners:
OJG86663.1
Glycosyl transferase.
       0.888
OJG86661.1
Trk system potassium uptake protein TrkA.
       0.886
OJG86660.1
LuxR family DNA-binding response regulator.
       0.788
OJG84564.1
Hypothetical protein.
  
    0.783
OJG88006.1
Hypothetical protein.
  
    0.778
OJG86659.1
Two-component system sensor histidine kinase.
       0.762
OJG86658.1
Hypothetical protein.
       0.719
OJG86248.1
Hypothetical protein.
  
     0.634
OJG84032.1
Dihydrolipoamide S-succinyltransferase.
  
     0.582
OJG86288.1
Hypothetical protein.
  
     0.515
Your Current Organism:
Enterococcus raffinosus
NCBI taxonomy Id: 71452
Other names: ATCC 49427, CCUG 29292, CIP 103329, DSM 5633, E. raffinosus, JCM 8733, LMG 12888, LMG:12888, NBRC 100492, NCIMB 12901, NCTC 12192
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