Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OJG78882.1 | OJG86269.1 | RV13_GL003382 | RV13_GL000456 | A/G-specific adenine glycosylase; Adenine glycosylase active on G-A mispairs. | Hypothetical protein. | 0.605 |
OJG81759.1 | OJG83605.1 | RV13_GL002980 | RV13_GL002591 | Pyruvate kinase; Belongs to the pyruvate kinase family. | ADP-ribose pyrophosphatase. | 0.901 |
OJG81759.1 | OJG84060.1 | RV13_GL002980 | RV13_GL002522 | Pyruvate kinase; Belongs to the pyruvate kinase family. | Pyruvate:ferredoxin (flavodoxin) oxidoreductase. | 0.992 |
OJG81759.1 | OJG86269.1 | RV13_GL002980 | RV13_GL000456 | Pyruvate kinase; Belongs to the pyruvate kinase family. | Hypothetical protein. | 0.836 |
OJG81759.1 | OJG86426.1 | RV13_GL002980 | RV13_GL000397 | Pyruvate kinase; Belongs to the pyruvate kinase family. | Pyruvate:ferredoxin (flavodoxin) oxidoreductase. | 0.992 |
OJG81759.1 | guaA | RV13_GL002980 | RV13_GL003775 | Pyruvate kinase; Belongs to the pyruvate kinase family. | GMP synthase; Catalyzes the synthesis of GMP from XMP. | 0.791 |
OJG81759.1 | guaB | RV13_GL002980 | RV13_GL002774 | Pyruvate kinase; Belongs to the pyruvate kinase family. | Inosine-5-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.838 |
OJG81759.1 | plsY | RV13_GL002980 | RV13_GL000457 | Pyruvate kinase; Belongs to the pyruvate kinase family. | Acyl-phosphate glycerol 3-phosphate acyltransferase; Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP. | 0.906 |
OJG83605.1 | OJG81759.1 | RV13_GL002591 | RV13_GL002980 | ADP-ribose pyrophosphatase. | Pyruvate kinase; Belongs to the pyruvate kinase family. | 0.901 |
OJG83605.1 | OJG84060.1 | RV13_GL002591 | RV13_GL002522 | ADP-ribose pyrophosphatase. | Pyruvate:ferredoxin (flavodoxin) oxidoreductase. | 0.644 |
OJG83605.1 | OJG86269.1 | RV13_GL002591 | RV13_GL000456 | ADP-ribose pyrophosphatase. | Hypothetical protein. | 0.582 |
OJG83605.1 | OJG86426.1 | RV13_GL002591 | RV13_GL000397 | ADP-ribose pyrophosphatase. | Pyruvate:ferredoxin (flavodoxin) oxidoreductase. | 0.644 |
OJG83605.1 | cinA | RV13_GL002591 | RV13_GL001206 | ADP-ribose pyrophosphatase. | Competence/damage-inducible protein CinA domain; Belongs to the CinA family. | 0.874 |
OJG83605.1 | guaB | RV13_GL002591 | RV13_GL002774 | ADP-ribose pyrophosphatase. | Inosine-5-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.907 |
OJG84060.1 | OJG81759.1 | RV13_GL002522 | RV13_GL002980 | Pyruvate:ferredoxin (flavodoxin) oxidoreductase. | Pyruvate kinase; Belongs to the pyruvate kinase family. | 0.992 |
OJG84060.1 | OJG83605.1 | RV13_GL002522 | RV13_GL002591 | Pyruvate:ferredoxin (flavodoxin) oxidoreductase. | ADP-ribose pyrophosphatase. | 0.644 |
OJG84060.1 | OJG86269.1 | RV13_GL002522 | RV13_GL000456 | Pyruvate:ferredoxin (flavodoxin) oxidoreductase. | Hypothetical protein. | 0.856 |
OJG84060.1 | OJG86426.1 | RV13_GL002522 | RV13_GL000397 | Pyruvate:ferredoxin (flavodoxin) oxidoreductase. | Pyruvate:ferredoxin (flavodoxin) oxidoreductase. | 0.999 |
OJG84060.1 | cinA | RV13_GL002522 | RV13_GL001206 | Pyruvate:ferredoxin (flavodoxin) oxidoreductase. | Competence/damage-inducible protein CinA domain; Belongs to the CinA family. | 0.446 |
OJG84060.1 | guaB | RV13_GL002522 | RV13_GL002774 | Pyruvate:ferredoxin (flavodoxin) oxidoreductase. | Inosine-5-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.928 |
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