STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OJG86338.1Hypothetical protein. (268 aa)    
Predicted Functional Partners:
OJG86339.1
Hypothetical protein.
 
 
 0.998
OJG86337.1
Hypothetical protein.
 
  
  0.995
OJG86340.1
Hypothetical protein.
 
 0.984
potA
Spermidine/putrescine import ATP-binding protein PotA; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.
 
 0.977
OJG85894.1
Spermidine/putrescine ABC transporter substrate-binding periplasmic protein PotD.
 
 
 0.977
OJG86336.1
Hypothetical protein.
 
     0.956
OJG85893.1
Spermidine/putrescine ABC transporter permease PotC.
 
 
 0.951
OJG78646.1
Hypothetical protein.
  
 
 0.943
OJG86335.1
Hypothetical protein.
 
     0.940
OJG78645.1
Hypothetical protein.
 
 0.924
Your Current Organism:
Enterococcus raffinosus
NCBI taxonomy Id: 71452
Other names: ATCC 49427, CCUG 29292, CIP 103329, DSM 5633, E. raffinosus, JCM 8733, LMG 12888, LMG:12888, NBRC 100492, NCIMB 12901, NCTC 12192
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.