STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OJG85538.1Hypothetical protein. (108 aa)    
Predicted Functional Partners:
OJG85537.1
Hypothetical protein.
 
 0.992
OJG85514.1
PTS system cellobiose-specific IIB component.
 
 0.988
OJG86853.1
PTS system, lactose/cellobiose family IIB component.
 
 0.986
OJG85536.1
Hypothetical protein; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane.
 
 
 0.985
OJG78389.1
PTS system, lactose/cellobiose family IIB component.
 
 0.985
OJG89454.1
Hypothetical protein.
 
 0.967
OJG89016.1
PTS system, lactose-specific IIC component.
 
 0.967
OJG85928.1
Hypothetical protein.
 
 0.964
OJG88136.1
Hypothetical protein.
 
 0.963
OJG84518.1
Hypothetical protein.
 
 0.953
Your Current Organism:
Enterococcus raffinosus
NCBI taxonomy Id: 71452
Other names: ATCC 49427, CCUG 29292, CIP 103329, DSM 5633, E. raffinosus, JCM 8733, LMG 12888, LMG:12888, NBRC 100492, NCIMB 12901, NCTC 12192
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.