STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OJG85554.1Glycine betaine/L-proline transport ATP binding subunit. (390 aa)    
Predicted Functional Partners:
OJG85552.1
Hypothetical protein.
 
 0.999
OJG85553.1
Glycine betaine/carnitine/choline ABC transporter permease.
 0.999
OJG87718.1
Glycine betaine/carnitine/choline ABC transporter.
 
 0.999
OJG85551.1
Hypothetical protein.
 0.998
OJG88344.1
Glycine betaine/carnitine/choline ABC transporter permease.
 0.991
OJG88345.1
Glycine betaine/carnitine/choline ABC transporter.
 
 0.991
OJG88346.1
ABC transporter permease.
 0.991
OJG87717.1
Hypothetical protein.
  
  
 
0.845
OJG88343.1
Glycine betaine/L-proline transport ATP binding subunit.
  
  
 
0.832
OJG85555.1
Hypothetical protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
    0.770
Your Current Organism:
Enterococcus raffinosus
NCBI taxonomy Id: 71452
Other names: ATCC 49427, CCUG 29292, CIP 103329, DSM 5633, E. raffinosus, JCM 8733, LMG 12888, LMG:12888, NBRC 100492, NCIMB 12901, NCTC 12192
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.