STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OJG85431.1Hypothetical protein. (86 aa)    
Predicted Functional Partners:
OJG85432.1
Hypothetical protein.
       0.893
OJG85430.1
Rhodanese-like domain protein.
 
   
 0.859
OJG85428.1
Hypothetical protein.
 
   
 0.851
OJG84119.1
Hypothetical protein.
  
  
 0.788
OJG84034.1
Hypothetical protein.
   
    0.764
OJG77517.1
Esterase.
  
  
 0.742
OJG85429.1
CoA disulfide reductase.
 
   
 0.721
OJG85433.1
Hypothetical protein.
       0.639
OJG86290.1
Hypothetical protein.
   
    0.613
OJG84578.1
Hypothetical protein.
   
    0.613
Your Current Organism:
Enterococcus raffinosus
NCBI taxonomy Id: 71452
Other names: ATCC 49427, CCUG 29292, CIP 103329, DSM 5633, E. raffinosus, JCM 8733, LMG 12888, LMG:12888, NBRC 100492, NCIMB 12901, NCTC 12192
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.