STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OJG85446.1Hypothetical protein. (328 aa)    
Predicted Functional Partners:
OJG84483.1
Hypothetical protein; Belongs to the proline racemase family.
 
  
 0.936
proC
Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.
  
 
 0.878
OJG83822.1
Proline-specific peptidase; Releases the N-terminal proline from various substrates. Belongs to the peptidase S33 family.
  
  
 0.868
OJG89486.1
Hypothetical protein; Belongs to the arginase family.
  
 
 0.820
OJG85265.1
Hypothetical protein; Belongs to the arginase family.
  
 
 0.820
OJG80546.1
Membrane protein.
 
     0.714
lysA
Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.
  
 
 0.661
OJG89526.1
Cysteine synthase A.
  
 
 0.650
OJG86371.1
Cysteine synthase A; Belongs to the cysteine synthase/cystathionine beta- synthase family.
  
 
 0.650
OJG80545.1
Transcriptional regulator.
 
     0.648
Your Current Organism:
Enterococcus raffinosus
NCBI taxonomy Id: 71452
Other names: ATCC 49427, CCUG 29292, CIP 103329, DSM 5633, E. raffinosus, JCM 8733, LMG 12888, LMG:12888, NBRC 100492, NCIMB 12901, NCTC 12192
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.