STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OJG85450.1Hypothetical protein. (291 aa)    
Predicted Functional Partners:
OJG84481.1
Hypothetical protein.
 
     0.778
OJG84482.1
Hypothetical protein.
 
     0.777
OJG84477.1
Hypothetical protein.
 
     0.776
OJG84480.1
D-proline reductase subunit gamma.
 
     0.771
OJG84478.1
Hypothetical protein.
 
     0.769
OJG84479.1
glycine/betaine/sarcosine/D-proline reductase family selenoprotein B.
 
     0.760
OJG84476.1
Hypothetical protein.
 
     0.647
OJG79854.1
Serine protease do-like htrA.
   
 
 0.629
OJG83823.1
Hypothetical protein.
  
     0.564
OJG84483.1
Hypothetical protein; Belongs to the proline racemase family.
 
     0.535
Your Current Organism:
Enterococcus raffinosus
NCBI taxonomy Id: 71452
Other names: ATCC 49427, CCUG 29292, CIP 103329, DSM 5633, E. raffinosus, JCM 8733, LMG 12888, LMG:12888, NBRC 100492, NCIMB 12901, NCTC 12192
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.