STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OJG85460.1Aspartate racemase; Belongs to the aspartate/glutamate racemases family. (230 aa)    
Predicted Functional Partners:
OJG87707.1
Asparagine synthase (glutamine-hydrolyzing).
 
  
 0.930
OJG86431.1
Aspartate racemase; Belongs to the aspartate/glutamate racemases family.
  
  
 
0.926
OJG82760.1
L-asparaginase.
    
 0.912
pyrB
Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.
    
 0.910
OJG88787.1
Aspartate 4-decarboxylase.
    
 0.827
OJG86921.1
Aspartate 4-decarboxylase.
    
 0.827
purF
Amidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine; In the C-terminal section; belongs to the purine/pyrimidine phosphoribosyltransferase family.
   
 
 0.814
OJG85459.1
Hypothetical protein.
       0.812
OJG85541.1
Glutamate decarboxylase; Belongs to the group II decarboxylase family.
    
  0.809
OJG85415.1
Glutamate decarboxylase; Belongs to the group II decarboxylase family.
    
  0.809
Your Current Organism:
Enterococcus raffinosus
NCBI taxonomy Id: 71452
Other names: ATCC 49427, CCUG 29292, CIP 103329, DSM 5633, E. raffinosus, JCM 8733, LMG 12888, LMG:12888, NBRC 100492, NCIMB 12901, NCTC 12192
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