STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OJG85250.1Hypothetical protein. (251 aa)    
Predicted Functional Partners:
OJG85864.1
acetyl-CoA C-acetyltransferase.
  
 0.912
OJG86426.1
Pyruvate:ferredoxin (flavodoxin) oxidoreductase.
    
 0.905
OJG84060.1
Pyruvate:ferredoxin (flavodoxin) oxidoreductase.
    
 0.905
OJG86617.1
Hypothetical protein.
  
 
 0.846
OJG84077.1
Urea carboxylase.
  
 
 0.837
OJG86157.1
acetyl-CoA carboxylase, biotin carboxylase subunit; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.
  
 
 0.826
OJG85122.1
Pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase.
   
 
 0.814
OJG84032.1
Dihydrolipoamide S-succinyltransferase.
   
 
 0.814
OJG85963.1
Glutamine synthetase.
    
 0.795
OJG89383.1
Oxidoreductase, zinc-binding.
  
 0.723
Your Current Organism:
Enterococcus raffinosus
NCBI taxonomy Id: 71452
Other names: ATCC 49427, CCUG 29292, CIP 103329, DSM 5633, E. raffinosus, JCM 8733, LMG 12888, LMG:12888, NBRC 100492, NCIMB 12901, NCTC 12192
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.