STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OJG85282.1Precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit. (167 aa)    
Predicted Functional Partners:
OJG85280.1
Hypothetical protein.
 
 
 0.996
OJG85283.1
precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit.
 
 
 0.992
cbiD
Cobalamin biosynthesis protein CbiD; Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A.
 
 
 0.988
OJG85284.1
Precorrin-4 C11-methyltransferase.
 
 
 0.983
OJG85286.1
precorrin-3B C17-methyltransferase.
 
 
 0.966
OJG85285.1
Hypothetical protein.
 
  
 0.957
OJG85287.1
Precorrin-6x reductase.
 
 
 0.954
OJG85290.1
Precorrin-2 C20-methyltransferase; Belongs to the precorrin methyltransferase family.
 
 
 0.952
OJG85278.1
Cobyrinic acid a,c-diamide synthase.
 
  
 0.915
cobD
Cobalamin biosynthesis protein CobD; Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group.
 
  
 0.910
Your Current Organism:
Enterococcus raffinosus
NCBI taxonomy Id: 71452
Other names: ATCC 49427, CCUG 29292, CIP 103329, DSM 5633, E. raffinosus, JCM 8733, LMG 12888, LMG:12888, NBRC 100492, NCIMB 12901, NCTC 12192
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