STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OJG85154.1AbrB family transcriptional regulator. (157 aa)    
Predicted Functional Partners:
OJG85153.1
Hypothetical protein.
 
   
 0.855
OJG85152.1
Hypothetical protein.
 
     0.813
OJG88680.1
Hypothetical protein.
 
  
 0.797
OJG83072.1
Hypothetical protein.
 
  
 0.787
OJG88029.1
Hypothetical protein.
 
  
 0.776
OJG89529.1
Hypothetical protein.
 
  
 0.774
OJG89451.1
Hypothetical protein.
 
  
 0.773
OJG86346.1
Hypothetical protein.
 
  
 0.757
OJG88363.1
Hypothetical protein.
 
  
 0.756
OJG88798.1
Hypothetical protein.
  
     0.707
Your Current Organism:
Enterococcus raffinosus
NCBI taxonomy Id: 71452
Other names: ATCC 49427, CCUG 29292, CIP 103329, DSM 5633, E. raffinosus, JCM 8733, LMG 12888, LMG:12888, NBRC 100492, NCIMB 12901, NCTC 12192
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.