Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| OJG76590.1 | OJG85172.1 | RV13_GL003972 | RV13_GL001198 | Hypothetical protein. | Sigma-70 family RNA polymerase sigma factor. | 0.820 |
| OJG85170.1 | OJG85171.1 | RV13_GL001196 | RV13_GL001197 | RNA methyltransferase, TrmH family, group 3; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | Hypothetical protein. | 0.983 |
| OJG85170.1 | OJG85172.1 | RV13_GL001196 | RV13_GL001198 | RNA methyltransferase, TrmH family, group 3; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | Sigma-70 family RNA polymerase sigma factor. | 0.883 |
| OJG85170.1 | OJG85173.1 | RV13_GL001196 | RV13_GL001199 | RNA methyltransferase, TrmH family, group 3; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | Veg family protein. | 0.742 |
| OJG85170.1 | mrnC | RV13_GL001196 | RV13_GL001195 | RNA methyltransferase, TrmH family, group 3; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | Ribonuclease III; Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc); Rnc processes 30S rRNA into smaller rRNA precursors; Belongs to the MrnC RNase family. | 0.962 |
| OJG85170.1 | rpoC | RV13_GL001196 | RV13_GL002534 | RNA methyltransferase, TrmH family, group 3; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.517 |
| OJG85171.1 | OJG85170.1 | RV13_GL001197 | RV13_GL001196 | Hypothetical protein. | RNA methyltransferase, TrmH family, group 3; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | 0.983 |
| OJG85171.1 | OJG85172.1 | RV13_GL001197 | RV13_GL001198 | Hypothetical protein. | Sigma-70 family RNA polymerase sigma factor. | 0.933 |
| OJG85171.1 | OJG85173.1 | RV13_GL001197 | RV13_GL001199 | Hypothetical protein. | Veg family protein. | 0.742 |
| OJG85171.1 | mrnC | RV13_GL001197 | RV13_GL001195 | Hypothetical protein. | Ribonuclease III; Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc); Rnc processes 30S rRNA into smaller rRNA precursors; Belongs to the MrnC RNase family. | 0.977 |
| OJG85172.1 | OJG76590.1 | RV13_GL001198 | RV13_GL003972 | Sigma-70 family RNA polymerase sigma factor. | Hypothetical protein. | 0.820 |
| OJG85172.1 | OJG85170.1 | RV13_GL001198 | RV13_GL001196 | Sigma-70 family RNA polymerase sigma factor. | RNA methyltransferase, TrmH family, group 3; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | 0.883 |
| OJG85172.1 | OJG85171.1 | RV13_GL001198 | RV13_GL001197 | Sigma-70 family RNA polymerase sigma factor. | Hypothetical protein. | 0.933 |
| OJG85172.1 | OJG85173.1 | RV13_GL001198 | RV13_GL001199 | Sigma-70 family RNA polymerase sigma factor. | Veg family protein. | 0.829 |
| OJG85172.1 | OJG87283.1 | RV13_GL001198 | RV13_GL003675 | Sigma-70 family RNA polymerase sigma factor. | Hypothetical protein. | 0.802 |
| OJG85172.1 | mrnC | RV13_GL001198 | RV13_GL001195 | Sigma-70 family RNA polymerase sigma factor. | Ribonuclease III; Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc); Rnc processes 30S rRNA into smaller rRNA precursors; Belongs to the MrnC RNase family. | 0.826 |
| OJG85172.1 | rpoA | RV13_GL001198 | RV13_GL002714 | Sigma-70 family RNA polymerase sigma factor. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.851 |
| OJG85172.1 | rpoB | RV13_GL001198 | RV13_GL002532 | Sigma-70 family RNA polymerase sigma factor. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.857 |
| OJG85172.1 | rpoC | RV13_GL001198 | RV13_GL002534 | Sigma-70 family RNA polymerase sigma factor. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.863 |
| OJG85172.1 | rpoZ | RV13_GL001198 | RV13_GL003681 | Sigma-70 family RNA polymerase sigma factor. | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.858 |
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