Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OJG81759.1 | OJG84704.1 | RV13_GL002980 | RV13_GL001683 | Pyruvate kinase; Belongs to the pyruvate kinase family. | LPXTG-domain-containing protein cell wall anchor domain. | 0.739 |
OJG81759.1 | OJG84705.1 | RV13_GL002980 | RV13_GL001684 | Pyruvate kinase; Belongs to the pyruvate kinase family. | Hypothetical protein. | 0.739 |
OJG81759.1 | OJG85025.1 | RV13_GL002980 | RV13_GL001400 | Pyruvate kinase; Belongs to the pyruvate kinase family. | LPXTG-domain-containing protein cell wall anchor domain. | 0.739 |
OJG81759.1 | OJG85026.1 | RV13_GL002980 | RV13_GL001401 | Pyruvate kinase; Belongs to the pyruvate kinase family. | Fimbrial isopeptide formation D2 domain-containing protein. | 0.739 |
OJG81759.1 | OJG85027.1 | RV13_GL002980 | RV13_GL001402 | Pyruvate kinase; Belongs to the pyruvate kinase family. | Fimbrial isopeptide formation D2 domain-containing protein. | 0.739 |
OJG81759.1 | OJG88338.1 | RV13_GL002980 | RV13_GL002658 | Pyruvate kinase; Belongs to the pyruvate kinase family. | LPXTG-domain-containing protein cell wall anchor domain. | 0.739 |
OJG84702.1 | OJG84704.1 | RV13_GL001681 | RV13_GL001683 | Sortase family protein. | LPXTG-domain-containing protein cell wall anchor domain. | 0.866 |
OJG84702.1 | OJG84705.1 | RV13_GL001681 | RV13_GL001684 | Sortase family protein. | Hypothetical protein. | 0.800 |
OJG84702.1 | OJG85025.1 | RV13_GL001681 | RV13_GL001400 | Sortase family protein. | LPXTG-domain-containing protein cell wall anchor domain. | 0.582 |
OJG84702.1 | OJG85026.1 | RV13_GL001681 | RV13_GL001401 | Sortase family protein. | Fimbrial isopeptide formation D2 domain-containing protein. | 0.842 |
OJG84702.1 | OJG85027.1 | RV13_GL001681 | RV13_GL001402 | Sortase family protein. | Fimbrial isopeptide formation D2 domain-containing protein. | 0.835 |
OJG84702.1 | OJG85065.1 | RV13_GL001681 | RV13_GL001440 | Sortase family protein. | Hypothetical protein. | 0.705 |
OJG84702.1 | OJG88338.1 | RV13_GL001681 | RV13_GL002658 | Sortase family protein. | LPXTG-domain-containing protein cell wall anchor domain. | 0.414 |
OJG84702.1 | OJG89466.1 | RV13_GL001681 | RV13_GL000091 | Sortase family protein. | Hypothetical protein. | 0.678 |
OJG84704.1 | OJG81759.1 | RV13_GL001683 | RV13_GL002980 | LPXTG-domain-containing protein cell wall anchor domain. | Pyruvate kinase; Belongs to the pyruvate kinase family. | 0.739 |
OJG84704.1 | OJG84702.1 | RV13_GL001683 | RV13_GL001681 | LPXTG-domain-containing protein cell wall anchor domain. | Sortase family protein. | 0.866 |
OJG84704.1 | OJG84705.1 | RV13_GL001683 | RV13_GL001684 | LPXTG-domain-containing protein cell wall anchor domain. | Hypothetical protein. | 0.932 |
OJG84704.1 | OJG85025.1 | RV13_GL001683 | RV13_GL001400 | LPXTG-domain-containing protein cell wall anchor domain. | LPXTG-domain-containing protein cell wall anchor domain. | 0.641 |
OJG84704.1 | OJG85027.1 | RV13_GL001683 | RV13_GL001402 | LPXTG-domain-containing protein cell wall anchor domain. | Fimbrial isopeptide formation D2 domain-containing protein. | 0.772 |
OJG84704.1 | OJG85028.1 | RV13_GL001683 | RV13_GL001403 | LPXTG-domain-containing protein cell wall anchor domain. | Sortase. | 0.785 |
page 1 of 5