STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OJG84751.1Auxin efflux carrier. (328 aa)    
Predicted Functional Partners:
OJG84750.1
Malate dehydrogenase (oxaloacetate-decarboxylating).
 
  
 0.936
OJG88764.1
Malate dehydrogenase (oxaloacetate-decarboxylating).
 
  
 0.816
OJG83071.1
Hypothetical protein.
  
  
 0.678
OJG84749.1
Hypothetical protein; Belongs to the LysR transcriptional regulatory family.
 
   
 0.677
OJG87703.1
Ankyrin repeat-containing protein.
  
 0.602
OJG83397.1
Hypothetical protein.
  
     0.515
OJG85162.1
Hypothetical protein.
    
  0.500
OJG81741.1
Hypothetical protein.
    
  0.500
OJG85957.1
Hypothetical protein.
    
  0.497
pepX
Hypothetical protein; Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline; Belongs to the peptidase S15 family.
 
     0.414
Your Current Organism:
Enterococcus raffinosus
NCBI taxonomy Id: 71452
Other names: ATCC 49427, CCUG 29292, CIP 103329, DSM 5633, E. raffinosus, JCM 8733, LMG 12888, LMG:12888, NBRC 100492, NCIMB 12901, NCTC 12192
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.