Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
OJG84684.1LPXTG-domain-containing protein cell wall anchor domain. (1599 aa)    
Predicted Functional Partners:
OJG84238.1
Hypothetical protein.
 
  
 0.457
OJG84242.1
Sortase.
 
   
 0.439
OJG84240.1
Cell surface protein.
 
  
 0.428
OJG89420.1
Hypothetical protein.
 
  
 0.409
OJG89045.1
Hypothetical protein.
  
     0.404
OJG89532.1
LPXTG-domain-containing protein cell wall anchor domain.
  
     0.400
Your Current Organism:
Enterococcus raffinosus
NCBI taxonomy Id: 71452
Other names: ATCC 49427, CCUG 29292, CIP 103329, DSM 5633, E. raffinosus, JCM 8733, LMG 12888, LMG:12888, NBRC 100492, NCIMB 12901, NCTC 12192
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