STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OJG84637.1Hypothetical protein. (382 aa)    
Predicted Functional Partners:
OJG84386.1
PTS system, mannitol-specific IIC component.
 
 
 0.949
OJG85916.1
PTS system, mannitol-specific IIC component.
 
 
 0.948
OJG84384.1
PTS system mannitol-specific transporter subunit IIA.
 
 0.948
OJG88748.1
PTS system, mannitol-specific IIC component.
 
 
 0.948
OJG85919.1
Hypothetical protein.
 
 0.933
OJG84385.1
Hypothetical protein.
 
 
 0.908
OJG85457.1
Hypothetical protein.
 
 
 0.892
OJG85532.1
Hypothetical protein.
 
 
 0.881
OJG86411.1
PTS system, Fru family, IIC component.
  
 
 0.865
OJG84638.1
HAD hydrolase, family IA.
    
 0.842
Your Current Organism:
Enterococcus raffinosus
NCBI taxonomy Id: 71452
Other names: ATCC 49427, CCUG 29292, CIP 103329, DSM 5633, E. raffinosus, JCM 8733, LMG 12888, LMG:12888, NBRC 100492, NCIMB 12901, NCTC 12192
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.