STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OJG84539.1Hypothetical protein. (456 aa)    
Predicted Functional Partners:
OJG84540.1
6-phosphogluconate dehydrogenase (decarboxylating).
 
 
 0.993
OJG81764.1
6-phosphogluconate dehydrogenase, decarboxylating; Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH.
 
 
 0.940
OJG84472.1
6-phosphogluconolactonase.
 
  
 0.937
OJG84773.1
L-ribulose-5-phosphate 4-epimerase.
  
 
 0.853
OJG84509.1
L-ribulose-5-phosphate 4-epimerase.
  
 
 0.853
OJG84215.1
L-ribulose-5-phosphate 4-epimerase.
  
 
 0.853
rhaA
L-rhamnose isomerase; Belongs to the rhamnose isomerase family.
  
 
 0.825
OJG85774.1
Ribulose-phosphate 3-epimerase.
    
 0.781
OJG89166.1
Ribulose-phosphate 3-epimerase.
    
 0.781
OJG84658.1
Ribulose-phosphate 3-epimerase.
    
 0.781
Your Current Organism:
Enterococcus raffinosus
NCBI taxonomy Id: 71452
Other names: ATCC 49427, CCUG 29292, CIP 103329, DSM 5633, E. raffinosus, JCM 8733, LMG 12888, LMG:12888, NBRC 100492, NCIMB 12901, NCTC 12192
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