STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OJG88661.1Hypothetical protein. (500 aa)    
Predicted Functional Partners:
OJG88660.1
Hypothetical protein.
      
0.765
OJG88360.1
Hypothetical protein.
  
     0.744
OJG89176.1
Hypothetical protein.
  
     0.725
OJG89450.1
Hypothetical protein.
  
     0.567
OJG85431.1
Hypothetical protein.
   
    0.564
OJG88762.1
Hypothetical protein.
  
     0.562
OJG85736.1
Hypothetical protein.
  
     0.558
OJG84239.1
WxL domain cell surface protein.
  
     0.509
OJG89467.1
Hypothetical protein.
  
     0.490
OJG84240.1
Cell surface protein.
  
     0.477
Your Current Organism:
Enterococcus raffinosus
NCBI taxonomy Id: 71452
Other names: ATCC 49427, CCUG 29292, CIP 103329, DSM 5633, E. raffinosus, JCM 8733, LMG 12888, LMG:12888, NBRC 100492, NCIMB 12901, NCTC 12192
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.