STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OJG88790.1Hypothetical protein. (130 aa)    
Predicted Functional Partners:
OJG79445.1
Flavocytochrome c.
  
 
 0.685
purA
Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.
    
  0.567
OJG82764.1
Aspartate kinase; Belongs to the aspartokinase family.
    
  0.543
OJG87707.1
Asparagine synthase (glutamine-hydrolyzing).
  
 
  0.510
OJG86431.1
Aspartate racemase; Belongs to the aspartate/glutamate racemases family.
   
 
  0.509
OJG85460.1
Aspartate racemase; Belongs to the aspartate/glutamate racemases family.
   
 
  0.509
OJG88791.1
Hypothetical protein.
       0.507
OJG86559.1
Hypothetical protein.
    
  0.472
OJG86560.1
Hypothetical protein.
    
  0.472
OJG86161.1
3-oxoacyl-[acyl-carrier-protein] reductase.
    
  0.472
Your Current Organism:
Enterococcus raffinosus
NCBI taxonomy Id: 71452
Other names: ATCC 49427, CCUG 29292, CIP 103329, DSM 5633, E. raffinosus, JCM 8733, LMG 12888, LMG:12888, NBRC 100492, NCIMB 12901, NCTC 12192
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