Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OJG79445.1 | OJG82764.1 | RV13_GL003321 | RV13_GL002931 | Flavocytochrome c. | Aspartate kinase; Belongs to the aspartokinase family. | 0.650 |
OJG79445.1 | OJG85460.1 | RV13_GL003321 | RV13_GL001036 | Flavocytochrome c. | Aspartate racemase; Belongs to the aspartate/glutamate racemases family. | 0.521 |
OJG79445.1 | OJG86161.1 | RV13_GL003321 | RV13_GL000639 | Flavocytochrome c. | 3-oxoacyl-[acyl-carrier-protein] reductase. | 0.677 |
OJG79445.1 | OJG86431.1 | RV13_GL003321 | RV13_GL000402 | Flavocytochrome c. | Aspartate racemase; Belongs to the aspartate/glutamate racemases family. | 0.521 |
OJG79445.1 | OJG86559.1 | RV13_GL003321 | RV13_GL000205 | Flavocytochrome c. | Hypothetical protein. | 0.677 |
OJG79445.1 | OJG86560.1 | RV13_GL003321 | RV13_GL000206 | Flavocytochrome c. | Hypothetical protein. | 0.677 |
OJG79445.1 | OJG87707.1 | RV13_GL003321 | RV13_GL003513 | Flavocytochrome c. | Asparagine synthase (glutamine-hydrolyzing). | 0.659 |
OJG79445.1 | OJG88790.1 | RV13_GL003321 | RV13_GL002200 | Flavocytochrome c. | Hypothetical protein. | 0.685 |
OJG79445.1 | purA | RV13_GL003321 | RV13_GL003647 | Flavocytochrome c. | Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family. | 0.712 |
OJG82764.1 | OJG79445.1 | RV13_GL002931 | RV13_GL003321 | Aspartate kinase; Belongs to the aspartokinase family. | Flavocytochrome c. | 0.650 |
OJG82764.1 | OJG87707.1 | RV13_GL002931 | RV13_GL003513 | Aspartate kinase; Belongs to the aspartokinase family. | Asparagine synthase (glutamine-hydrolyzing). | 0.957 |
OJG82764.1 | OJG88790.1 | RV13_GL002931 | RV13_GL002200 | Aspartate kinase; Belongs to the aspartokinase family. | Hypothetical protein. | 0.543 |
OJG82764.1 | purA | RV13_GL002931 | RV13_GL003647 | Aspartate kinase; Belongs to the aspartokinase family. | Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family. | 0.938 |
OJG85460.1 | OJG79445.1 | RV13_GL001036 | RV13_GL003321 | Aspartate racemase; Belongs to the aspartate/glutamate racemases family. | Flavocytochrome c. | 0.521 |
OJG85460.1 | OJG86431.1 | RV13_GL001036 | RV13_GL000402 | Aspartate racemase; Belongs to the aspartate/glutamate racemases family. | Aspartate racemase; Belongs to the aspartate/glutamate racemases family. | 0.926 |
OJG85460.1 | OJG87707.1 | RV13_GL001036 | RV13_GL003513 | Aspartate racemase; Belongs to the aspartate/glutamate racemases family. | Asparagine synthase (glutamine-hydrolyzing). | 0.930 |
OJG85460.1 | OJG88790.1 | RV13_GL001036 | RV13_GL002200 | Aspartate racemase; Belongs to the aspartate/glutamate racemases family. | Hypothetical protein. | 0.509 |
OJG86161.1 | OJG79445.1 | RV13_GL000639 | RV13_GL003321 | 3-oxoacyl-[acyl-carrier-protein] reductase. | Flavocytochrome c. | 0.677 |
OJG86161.1 | OJG86560.1 | RV13_GL000639 | RV13_GL000206 | 3-oxoacyl-[acyl-carrier-protein] reductase. | Hypothetical protein. | 0.764 |
OJG86161.1 | OJG88790.1 | RV13_GL000639 | RV13_GL002200 | 3-oxoacyl-[acyl-carrier-protein] reductase. | Hypothetical protein. | 0.472 |
page 1 of 3