Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OJG84239.1 | OJG84240.1 | RV13_GL002265 | RV13_GL002266 | WxL domain cell surface protein. | Cell surface protein. | 0.879 |
OJG84239.1 | OJG84241.1 | RV13_GL002265 | RV13_GL002267 | WxL domain cell surface protein. | LPXTG-domain-containing protein cell wall anchor domain. | 0.944 |
OJG84239.1 | OJG84242.1 | RV13_GL002265 | RV13_GL002268 | WxL domain cell surface protein. | Sortase. | 0.537 |
OJG84239.1 | OJG84243.1 | RV13_GL002265 | RV13_GL002269 | WxL domain cell surface protein. | Hypothetical protein. | 0.508 |
OJG84239.1 | OJG84244.1 | RV13_GL002265 | RV13_GL002270 | WxL domain cell surface protein. | Hypothetical protein. | 0.728 |
OJG84240.1 | OJG84239.1 | RV13_GL002266 | RV13_GL002265 | Cell surface protein. | WxL domain cell surface protein. | 0.879 |
OJG84240.1 | OJG84241.1 | RV13_GL002266 | RV13_GL002267 | Cell surface protein. | LPXTG-domain-containing protein cell wall anchor domain. | 0.932 |
OJG84240.1 | OJG84242.1 | RV13_GL002266 | RV13_GL002268 | Cell surface protein. | Sortase. | 0.613 |
OJG84240.1 | OJG84243.1 | RV13_GL002266 | RV13_GL002269 | Cell surface protein. | Hypothetical protein. | 0.535 |
OJG84240.1 | OJG84244.1 | RV13_GL002266 | RV13_GL002270 | Cell surface protein. | Hypothetical protein. | 0.735 |
OJG84240.1 | OJG87066.1 | RV13_GL002266 | RV13_GL003867 | Cell surface protein. | Fimbrial isopeptide formation D2 domain-containing protein. | 0.425 |
OJG84241.1 | OJG84239.1 | RV13_GL002267 | RV13_GL002265 | LPXTG-domain-containing protein cell wall anchor domain. | WxL domain cell surface protein. | 0.944 |
OJG84241.1 | OJG84240.1 | RV13_GL002267 | RV13_GL002266 | LPXTG-domain-containing protein cell wall anchor domain. | Cell surface protein. | 0.932 |
OJG84241.1 | OJG84242.1 | RV13_GL002267 | RV13_GL002268 | LPXTG-domain-containing protein cell wall anchor domain. | Sortase. | 0.755 |
OJG84241.1 | OJG84243.1 | RV13_GL002267 | RV13_GL002269 | LPXTG-domain-containing protein cell wall anchor domain. | Hypothetical protein. | 0.689 |
OJG84241.1 | OJG84244.1 | RV13_GL002267 | RV13_GL002270 | LPXTG-domain-containing protein cell wall anchor domain. | Hypothetical protein. | 0.712 |
OJG84241.1 | OJG87066.1 | RV13_GL002267 | RV13_GL003867 | LPXTG-domain-containing protein cell wall anchor domain. | Fimbrial isopeptide formation D2 domain-containing protein. | 0.426 |
OJG84242.1 | OJG84239.1 | RV13_GL002268 | RV13_GL002265 | Sortase. | WxL domain cell surface protein. | 0.537 |
OJG84242.1 | OJG84240.1 | RV13_GL002268 | RV13_GL002266 | Sortase. | Cell surface protein. | 0.613 |
OJG84242.1 | OJG84241.1 | RV13_GL002268 | RV13_GL002267 | Sortase. | LPXTG-domain-containing protein cell wall anchor domain. | 0.755 |
page 1 of 3