STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OJG84242.1Sortase. (239 aa)    
Predicted Functional Partners:
OJG84241.1
LPXTG-domain-containing protein cell wall anchor domain.
       0.755
OJG84243.1
Hypothetical protein.
       0.727
OJG84244.1
Hypothetical protein.
 
     0.684
OJG87067.1
Sortase.
 
   
 0.638
OJG84240.1
Cell surface protein.
  
    0.613
OJG84702.1
Sortase family protein.
 
   
 0.609
OJG87066.1
Fimbrial isopeptide formation D2 domain-containing protein.
 
  
 0.605
OJG86947.1
Sortase.
 
   
 0.571
OJG86948.1
Sortase.
 
   
 0.557
OJG84239.1
WxL domain cell surface protein.
       0.537
Your Current Organism:
Enterococcus raffinosus
NCBI taxonomy Id: 71452
Other names: ATCC 49427, CCUG 29292, CIP 103329, DSM 5633, E. raffinosus, JCM 8733, LMG 12888, LMG:12888, NBRC 100492, NCIMB 12901, NCTC 12192
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