Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OJG80550.1 | OJG84198.1 | RV13_GL003226 | RV13_GL002330 | LacI family transcriptional regulator. | Hypothetical protein. | 0.799 |
OJG80550.1 | OJG89156.1 | RV13_GL003226 | RV13_GL001366 | LacI family transcriptional regulator. | Hypothetical protein. | 0.728 |
OJG81759.1 | OJG84198.1 | RV13_GL002980 | RV13_GL002330 | Pyruvate kinase; Belongs to the pyruvate kinase family. | Hypothetical protein. | 0.766 |
OJG81759.1 | OJG85035.1 | RV13_GL002980 | RV13_GL001410 | Pyruvate kinase; Belongs to the pyruvate kinase family. | PTS system, beta-glucoside-specific IIABC component. | 0.724 |
OJG81759.1 | OJG86172.1 | RV13_GL002980 | RV13_GL000650 | Pyruvate kinase; Belongs to the pyruvate kinase family. | Phosphocarrier protein HPr. | 0.617 |
OJG81759.1 | OJG86617.1 | RV13_GL002980 | RV13_GL000263 | Pyruvate kinase; Belongs to the pyruvate kinase family. | Hypothetical protein. | 0.853 |
OJG81759.1 | OJG89109.1 | RV13_GL002980 | RV13_GL001319 | Pyruvate kinase; Belongs to the pyruvate kinase family. | PTS system, sucrose-specific IIBC component. | 0.724 |
OJG81759.1 | OJG89156.1 | RV13_GL002980 | RV13_GL001366 | Pyruvate kinase; Belongs to the pyruvate kinase family. | Hypothetical protein. | 0.766 |
OJG81759.1 | guaA | RV13_GL002980 | RV13_GL003775 | Pyruvate kinase; Belongs to the pyruvate kinase family. | GMP synthase; Catalyzes the synthesis of GMP from XMP. | 0.791 |
OJG81759.1 | guaB | RV13_GL002980 | RV13_GL002774 | Pyruvate kinase; Belongs to the pyruvate kinase family. | Inosine-5-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.838 |
OJG84198.1 | OJG80550.1 | RV13_GL002330 | RV13_GL003226 | Hypothetical protein. | LacI family transcriptional regulator. | 0.799 |
OJG84198.1 | OJG81759.1 | RV13_GL002330 | RV13_GL002980 | Hypothetical protein. | Pyruvate kinase; Belongs to the pyruvate kinase family. | 0.766 |
OJG84198.1 | OJG84199.1 | RV13_GL002330 | RV13_GL002331 | Hypothetical protein. | Hypothetical protein. | 0.812 |
OJG84198.1 | OJG85035.1 | RV13_GL002330 | RV13_GL001410 | Hypothetical protein. | PTS system, beta-glucoside-specific IIABC component. | 0.697 |
OJG84198.1 | OJG86172.1 | RV13_GL002330 | RV13_GL000650 | Hypothetical protein. | Phosphocarrier protein HPr. | 0.795 |
OJG84198.1 | OJG86617.1 | RV13_GL002330 | RV13_GL000263 | Hypothetical protein. | Hypothetical protein. | 0.866 |
OJG84198.1 | OJG89109.1 | RV13_GL002330 | RV13_GL001319 | Hypothetical protein. | PTS system, sucrose-specific IIBC component. | 0.697 |
OJG84198.1 | OJG89156.1 | RV13_GL002330 | RV13_GL001366 | Hypothetical protein. | Hypothetical protein. | 0.772 |
OJG84198.1 | guaA | RV13_GL002330 | RV13_GL003775 | Hypothetical protein. | GMP synthase; Catalyzes the synthesis of GMP from XMP. | 0.735 |
OJG84198.1 | guaB | RV13_GL002330 | RV13_GL002774 | Hypothetical protein. | Inosine-5-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.719 |
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